T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 26269..53127
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FDG16_RS24550 (FDG16_24620) | 22236..22670 | + | 435 | WP_000845953 | conjugation system SOS inhibitor PsiB | - |
| FDG16_RS24555 (FDG16_24625) | 22667..23386 | + | 720 | WP_013362833 | plasmid SOS inhibition protein A | - |
| FDG16_RS25765 | 23608..23757 | + | 150 | Protein_27 | plasmid maintenance protein Mok | - |
| FDG16_RS24560 (FDG16_24630) | 23699..23824 | + | 126 | WP_001372321 | type I toxin-antitoxin system Hok family toxin | - |
| FDG16_RS25770 | 24044..24274 | + | 231 | WP_001426396 | hypothetical protein | - |
| FDG16_RS25775 (FDG16_24635) | 24272..24445 | - | 174 | Protein_30 | hypothetical protein | - |
| FDG16_RS25780 | 24515..24721 | + | 207 | WP_000547968 | hypothetical protein | - |
| FDG16_RS24570 (FDG16_24645) | 24746..25033 | + | 288 | WP_000107544 | hypothetical protein | - |
| FDG16_RS24575 (FDG16_24650) | 25151..25972 | + | 822 | WP_001234469 | DUF932 domain-containing protein | - |
| FDG16_RS24580 (FDG16_24655) | 26269..26916 | - | 648 | WP_031943493 | transglycosylase SLT domain-containing protein | virB1 |
| FDG16_RS24585 (FDG16_24660) | 27193..27576 | + | 384 | WP_000124981 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| FDG16_RS24590 (FDG16_24665) | 27767..28453 | + | 687 | WP_000332484 | PAS domain-containing protein | - |
| FDG16_RS24595 (FDG16_24670) | 28547..28774 | + | 228 | WP_001254386 | conjugal transfer relaxosome protein TraY | - |
| FDG16_RS24600 (FDG16_24675) | 28808..29167 | + | 360 | WP_000340272 | type IV conjugative transfer system pilin TraA | - |
| FDG16_RS24605 (FDG16_24680) | 29182..29493 | + | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| FDG16_RS24610 (FDG16_24685) | 29515..30081 | + | 567 | WP_000399792 | type IV conjugative transfer system protein TraE | traE |
| FDG16_RS24615 (FDG16_24690) | 30068..30796 | + | 729 | WP_001230813 | type-F conjugative transfer system secretin TraK | traK |
| FDG16_RS24620 (FDG16_24695) | 30796..32223 | + | 1428 | WP_000146685 | F-type conjugal transfer pilus assembly protein TraB | traB |
| FDG16_RS24625 (FDG16_24700) | 32213..32803 | + | 591 | WP_000002787 | conjugal transfer pilus-stabilizing protein TraP | - |
| FDG16_RS24630 (FDG16_24705) | 32790..33110 | + | 321 | WP_001057287 | conjugal transfer protein TrbD | virb4 |
| FDG16_RS24635 (FDG16_24710) | 33103..33354 | + | 252 | WP_001038342 | conjugal transfer protein TrbG | - |
| FDG16_RS24640 (FDG16_24715) | 33351..33866 | + | 516 | WP_015059130 | type IV conjugative transfer system lipoprotein TraV | traV |
| FDG16_RS24645 (FDG16_24720) | 34001..34222 | + | 222 | WP_001278695 | conjugal transfer protein TraR | - |
| FDG16_RS24650 (FDG16_24725) | 34215..34691 | + | 477 | WP_015059129 | hypothetical protein | - |
| FDG16_RS24655 (FDG16_24730) | 34771..34985 | + | 215 | Protein_49 | hypothetical protein | - |
| FDG16_RS24660 (FDG16_24735) | 35013..35375 | + | 363 | WP_000836675 | hypothetical protein | - |
| FDG16_RS24665 (FDG16_24740) | 35501..38131 | + | 2631 | WP_000069764 | type IV secretion system protein TraC | virb4 |
| FDG16_RS24670 (FDG16_24745) | 38128..38514 | + | 387 | WP_000214092 | type-F conjugative transfer system protein TrbI | - |
| FDG16_RS24675 (FDG16_24750) | 38511..39143 | + | 633 | WP_001203720 | type-F conjugative transfer system protein TraW | traW |
| FDG16_RS24680 (FDG16_24755) | 39140..40132 | + | 993 | WP_000830839 | conjugal transfer pilus assembly protein TraU | traU |
| FDG16_RS24685 (FDG16_24760) | 40141..40779 | + | 639 | WP_000777692 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| FDG16_RS24690 (FDG16_24765) | 40776..42584 | + | 1809 | WP_000821821 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| FDG16_RS24695 (FDG16_24770) | 42611..42868 | + | 258 | WP_000864352 | conjugal transfer protein TrbE | - |
| FDG16_RS24700 (FDG16_24775) | 42861..43604 | + | 744 | WP_001430248 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| FDG16_RS24705 (FDG16_24780) | 43620..43967 | + | 348 | WP_001287891 | conjugal transfer protein TrbA | - |
| FDG16_RS24710 (FDG16_24785) | 44086..44370 | + | 285 | WP_000624109 | type-F conjugative transfer system pilin chaperone TraQ | - |
| FDG16_RS24715 (FDG16_24790) | 44357..44902 | + | 546 | WP_000059821 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| FDG16_RS24720 (FDG16_24795) | 44832..45194 | + | 363 | WP_010379880 | P-type conjugative transfer protein TrbJ | - |
| FDG16_RS24725 (FDG16_24800) | 45191..46567 | + | 1377 | WP_029400169 | conjugal transfer pilus assembly protein TraH | traH |
| FDG16_RS24730 (FDG16_24805) | 46564..49389 | + | 2826 | WP_001007045 | conjugal transfer mating-pair stabilization protein TraG | traG |
| FDG16_RS24735 (FDG16_24810) | 49386..49895 | + | 510 | WP_031943494 | conjugal transfer entry exclusion protein TraS | - |
| FDG16_RS24740 (FDG16_24815) | 49909..50640 | + | 732 | WP_000850424 | conjugal transfer complement resistance protein TraT | - |
| FDG16_RS24745 (FDG16_24820) | 50893..53127 | + | 2235 | WP_021532655 | type IV conjugative transfer system coupling protein TraD | virb4 |