T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 54463..65140
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LDN68_RS22440 | 49974..50039 | - | 66 | Protein_57 | hypothetical protein | - |
| LDN68_RS22445 (KAM345_043520) | 50087..50938 | + | 852 | WP_223955011 | recombinase family protein | - |
| LDN68_RS22450 (KAM345_043530) | 50940..51614 | - | 675 | WP_011178411 | DNA methylase | - |
| LDN68_RS22455 (KAM345_043540) | 51769..52200 | - | 432 | WP_001665065 | OmpA family protein | - |
| LDN68_RS22460 (KAM345_043550) | 52216..52914 | - | 699 | WP_011114053 | TraX family protein | - |
| LDN68_RS22465 (KAM345_043560) | 52914..53180 | - | 267 | WP_010890140 | hypothetical protein | - |
| LDN68_RS22470 (KAM345_043570) | 53209..53844 | - | 636 | WP_011114052 | transglycosylase SLT domain-containing protein | - |
| LDN68_RS22475 (KAM345_043580) | 53858..54445 | - | 588 | WP_010890138 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| LDN68_RS22480 (KAM345_043590) | 54463..56181 | - | 1719 | WP_011114051 | P-type conjugative transfer protein TrbL | virB6 |
| LDN68_RS22485 (KAM345_043600) | 56192..56419 | - | 228 | WP_000644148 | entry exclusion lipoprotein TrbK | - |
| LDN68_RS22490 (KAM345_043610) | 56429..57193 | - | 765 | WP_010890135 | P-type conjugative transfer protein TrbJ | virB5 |
| LDN68_RS22495 (KAM345_043620) | 57214..58635 | - | 1422 | WP_223955012 | TrbI/VirB10 family protein | virB10 |
| LDN68_RS22500 (KAM345_043630) | 58640..59128 | - | 489 | WP_006122479 | conjugal transfer protein TrbH | - |
| LDN68_RS22505 (KAM345_043640) | 59131..60030 | - | 900 | WP_006122480 | P-type conjugative transfer protein TrbG | virB9 |
| LDN68_RS22510 (KAM345_043650) | 60048..60830 | - | 783 | WP_006122481 | conjugal transfer protein TrbF | virB8 |
| LDN68_RS22515 (KAM345_043660) | 60827..63385 | - | 2559 | WP_011342945 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| LDN68_RS22520 (KAM345_043670) | 63382..63693 | - | 312 | WP_001207961 | conjugal transfer protein TrbD | virB3 |
| LDN68_RS22525 (KAM345_043680) | 63697..64161 | - | 465 | WP_011114046 | conjugal transfer system pilin TrbC | virB2 |
| LDN68_RS22530 (KAM345_043690) | 64178..65140 | - | 963 | WP_000132020 | P-type conjugative transfer ATPase TrbB | virB11 |
| LDN68_RS22535 (KAM345_043700) | 65450..65812 | - | 363 | WP_010890126 | transcriptional regulator | - |
| LDN68_RS22540 (KAM345_043710) | 65926..66267 | + | 342 | WP_000019167 | single-stranded DNA-binding protein | - |