T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 53306..63983
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LDN97_RS23475 | 48817..48882 | - | 66 | Protein_54 | hypothetical protein | - |
| LDN97_RS23480 (KAM339_045500) | 48930..49781 | + | 852 | WP_223955011 | recombinase family protein | - |
| LDN97_RS23485 (KAM339_045510) | 49783..50457 | - | 675 | WP_011178411 | DNA methylase | - |
| LDN97_RS23490 (KAM339_045520) | 50612..51043 | - | 432 | WP_001665065 | OmpA family protein | - |
| LDN97_RS23495 (KAM339_045530) | 51059..51757 | - | 699 | WP_011114053 | TraX family protein | - |
| LDN97_RS23500 (KAM339_045540) | 51757..52023 | - | 267 | WP_010890140 | hypothetical protein | - |
| LDN97_RS23505 (KAM339_045550) | 52052..52687 | - | 636 | WP_011114052 | transglycosylase SLT domain-containing protein | - |
| LDN97_RS23510 (KAM339_045560) | 52701..53288 | - | 588 | WP_010890138 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| LDN97_RS23515 (KAM339_045570) | 53306..55024 | - | 1719 | WP_011114051 | P-type conjugative transfer protein TrbL | virB6 |
| LDN97_RS23520 (KAM339_045580) | 55035..55262 | - | 228 | WP_000644148 | entry exclusion lipoprotein TrbK | - |
| LDN97_RS23525 (KAM339_045590) | 55272..56036 | - | 765 | WP_010890135 | P-type conjugative transfer protein TrbJ | virB5 |
| LDN97_RS23530 (KAM339_045600) | 56057..57478 | - | 1422 | WP_223955012 | TrbI/VirB10 family protein | virB10 |
| LDN97_RS23535 (KAM339_045610) | 57483..57971 | - | 489 | WP_006122479 | conjugal transfer protein TrbH | - |
| LDN97_RS23540 (KAM339_045620) | 57974..58873 | - | 900 | WP_006122480 | P-type conjugative transfer protein TrbG | virB9 |
| LDN97_RS23545 (KAM339_045630) | 58891..59673 | - | 783 | WP_006122481 | conjugal transfer protein TrbF | virB8 |
| LDN97_RS23550 (KAM339_045640) | 59670..62228 | - | 2559 | WP_011342945 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| LDN97_RS23555 (KAM339_045650) | 62225..62536 | - | 312 | WP_001207961 | conjugal transfer protein TrbD | virB3 |
| LDN97_RS23560 (KAM339_045660) | 62540..63004 | - | 465 | WP_011114046 | conjugal transfer system pilin TrbC | virB2 |
| LDN97_RS23565 (KAM339_045670) | 63021..63983 | - | 963 | WP_000132020 | P-type conjugative transfer ATPase TrbB | virB11 |
| LDN97_RS23570 (KAM339_045680) | 64293..64655 | - | 363 | WP_010890126 | transcriptional regulator | - |
| LDN97_RS23575 (KAM339_045690) | 64769..65110 | + | 342 | WP_000019167 | single-stranded DNA-binding protein | - |