T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 21783..32068
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CHC34_RS27190 (CHC34_28510) | 16864..17061 | - | 198 | WP_024252921 | DUF905 family protein | - |
| CHC34_RS27195 (CHC34_28515) | 17151..17735 | - | 585 | WP_115734825 | hypothetical protein | - |
| CHC34_RS27200 (CHC34_28520) | 17732..17980 | - | 249 | WP_039696244 | hypothetical protein | - |
| CHC34_RS27205 (CHC34_28525) | 17980..18288 | - | 309 | WP_003019666 | HigA family addiction module antitoxin | - |
| CHC34_RS27210 (CHC34_28530) | 18297..18596 | - | 300 | WP_024252918 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CHC34_RS27215 (CHC34_28535) | 19661..20554 | - | 894 | WP_094334517 | plasmid replication initiator TrfA | - |
| CHC34_RS27220 (CHC34_28540) | 20648..21019 | - | 372 | WP_094334516 | single-stranded DNA-binding protein | - |
| CHC34_RS27225 (CHC34_28545) | 21125..21529 | + | 405 | WP_003019654 | transcriptional regulator | - |
| CHC34_RS27230 (CHC34_28550) | 21783..22670 | + | 888 | WP_024252965 | P-type conjugative transfer ATPase TrbB | virB11 |
| CHC34_RS27235 (CHC34_28555) | 22784..23167 | + | 384 | WP_115734824 | TrbC/VirB2 family protein | virB2 |
| CHC34_RS27240 (CHC34_28560) | 23170..23496 | + | 327 | WP_024252963 | conjugal transfer protein TrbD | virB3 |
| CHC34_RS27245 (CHC34_28565) | 23493..26036 | + | 2544 | WP_109885657 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| CHC34_RS27250 (CHC34_28570) | 26033..26740 | + | 708 | WP_024252961 | VirB8/TrbF family protein | virB8 |
| CHC34_RS27255 (CHC34_28575) | 26756..27646 | + | 891 | WP_032310197 | P-type conjugative transfer protein TrbG | virB9 |
| CHC34_RS27260 (CHC34_28580) | 27649..28101 | + | 453 | WP_032194780 | conjugal transfer protein TrbH | - |
| CHC34_RS27265 (CHC34_28585) | 28105..29499 | + | 1395 | WP_003019636 | TrbI/VirB10 family protein | virB10 |
| CHC34_RS27270 (CHC34_28590) | 29512..30294 | + | 783 | WP_039696233 | P-type conjugative transfer protein TrbJ | virB5 |
| CHC34_RS27275 (CHC34_28595) | 30304..30504 | + | 201 | WP_059338537 | hypothetical protein | - |
| CHC34_RS27280 (CHC34_28600) | 30563..32068 | + | 1506 | WP_165571373 | P-type conjugative transfer protein TrbL | virB6 |
| CHC34_RS27285 (CHC34_28605) | 32079..32384 | + | 306 | WP_032310194 | lipoprotein | - |
| CHC34_RS27290 (CHC34_28610) | 32400..33170 | + | 771 | WP_003019622 | conjugal transfer protein TrbN | - |
| CHC34_RS27295 (CHC34_28615) | 33187..33873 | + | 687 | WP_074422775 | TraX family protein | - |
| CHC34_RS28665 | 34317..34412 | + | 96 | WP_003019619 | DinQ-like type I toxin DqlB | - |
| CHC34_RS27300 (CHC34_28620) | 34473..34793 | - | 321 | WP_154808167 | hypothetical protein | - |
| CHC34_RS27305 (CHC34_28625) | 35276..35506 | - | 231 | WP_039696288 | hypothetical protein | - |
| CHC34_RS27310 (CHC34_28630) | 35659..36162 | - | 504 | WP_094334535 | thermonuclease family protein | - |
| CHC34_RS27315 (CHC34_28635) | 36162..36413 | - | 252 | WP_215424271 | hypothetical protein | - |
| CHC34_RS27320 (CHC34_28640) | 36403..36726 | - | 324 | WP_154808168 | hypothetical protein | - |