T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 46651..73952
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CHC34_RS26405 (CHC34_27675) | 46413..46628 | + | 216 | Protein_43 | toxin-antitoxin system antitoxin VapB | - |
| CHC34_RS26410 (CHC34_27680) | 46651..48945 | - | 2295 | WP_154808114 | type IV conjugative transfer system coupling protein TraD | prgC |
| CHC34_RS26415 (CHC34_27685) | 49324..50055 | - | 732 | WP_023222655 | conjugal transfer complement resistance protein TraT | - |
| CHC34_RS26420 (CHC34_27690) | 50387..50866 | - | 480 | WP_023222656 | w0091 protein | - |
| CHC34_RS26425 (CHC34_27695) | 50888..53710 | - | 2823 | WP_023222657 | conjugal transfer mating-pair stabilization protein TraG | traG |
| CHC34_RS26430 (CHC34_27700) | 53707..55089 | - | 1383 | WP_023222658 | conjugal transfer pilus assembly protein TraH | traH |
| CHC34_RS26435 (CHC34_27705) | 55079..55639 | - | 561 | WP_023222659 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| CHC34_RS26440 (CHC34_27710) | 55626..55919 | - | 294 | WP_044152160 | type-F conjugative transfer system pilin chaperone TraQ | - |
| CHC34_RS26445 (CHC34_27715) | 56008..56331 | + | 324 | WP_023222661 | hypothetical protein | - |
| CHC34_RS26450 (CHC34_27725) | 56714..57463 | - | 750 | WP_023222663 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| CHC34_RS26455 (CHC34_27730) | 57476..57691 | - | 216 | WP_023222664 | conjugal transfer protein TrbE | - |
| CHC34_RS26460 (CHC34_27735) | 57702..58178 | - | 477 | WP_023222665 | hypothetical protein | - |
| CHC34_RS26465 (CHC34_27740) | 58189..60030 | - | 1842 | WP_023222666 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| CHC34_RS26470 | 60272..60409 | + | 138 | WP_154808115 | hypothetical protein | - |
| CHC34_RS26475 (CHC34_27750) | 60430..61059 | - | 630 | WP_024147740 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| CHC34_RS26480 (CHC34_27755) | 61068..62060 | - | 993 | WP_023222669 | conjugal transfer pilus assembly protein TraU | traU |
| CHC34_RS26485 (CHC34_27760) | 62057..62689 | - | 633 | WP_023222670 | type-F conjugative transfer system protein TraW | traW |
| CHC34_RS26490 (CHC34_27765) | 62686..63072 | - | 387 | WP_023222671 | type-F conjugative transfer system protein TrbI | - |
| CHC34_RS26495 (CHC34_27770) | 63050..65696 | - | 2647 | Protein_61 | type IV secretion system protein TraC | - |
| CHC34_RS26500 (CHC34_27775) | 65706..66092 | - | 387 | WP_023222673 | hypothetical protein | - |
| CHC34_RS26505 (CHC34_27780) | 66089..66556 | - | 468 | WP_023222674 | hypothetical protein | - |
| CHC34_RS26510 (CHC34_27785) | 66549..66770 | - | 222 | WP_023222675 | conjugal transfer protein TraR | - |
| CHC34_RS26515 (CHC34_27790) | 66898..67416 | - | 519 | WP_023222676 | type IV conjugative transfer system lipoprotein TraV | traV |
| CHC34_RS26520 (CHC34_27795) | 67413..67577 | - | 165 | WP_023222677 | hypothetical protein | virb4 |
| CHC34_RS26525 (CHC34_27800) | 67564..68100 | - | 537 | WP_023222678 | conjugal transfer pilus-stabilizing protein TraP | - |
| CHC34_RS26530 (CHC34_27805) | 68090..69508 | - | 1419 | WP_023222679 | F-type conjugal transfer pilus assembly protein TraB | traB |
| CHC34_RS26535 (CHC34_27810) | 69508..70242 | - | 735 | WP_023222680 | type-F conjugative transfer system secretin TraK | traK |
| CHC34_RS26540 (CHC34_27815) | 70229..70795 | - | 567 | WP_023222681 | type IV conjugative transfer system protein TraE | traE |
| CHC34_RS26545 (CHC34_27820) | 70816..71127 | - | 312 | WP_023222682 | type IV conjugative transfer system protein TraL | traL |
| CHC34_RS26550 (CHC34_27825) | 71142..71516 | - | 375 | WP_023222683 | type IV conjugative transfer system pilin TraA | - |
| CHC34_RS26555 (CHC34_27830) | 71589..71771 | - | 183 | WP_024147741 | conjugal transfer relaxosome protein TraY | - |
| CHC34_RS26560 (CHC34_27835) | 72681..73067 | - | 387 | WP_023222684 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| CHC34_RS26565 (CHC34_27845) | 73482..73952 | + | 471 | WP_023222685 | transglycosylase SLT domain-containing protein | virB1 |
| CHC34_RS26570 (CHC34_27850) | 74272..75093 | - | 822 | WP_023222686 | DUF932 domain-containing protein | - |
| CHC34_RS26575 (CHC34_27855) | 75198..75422 | - | 225 | WP_023222687 | hypothetical protein | - |
| CHC34_RS26580 (CHC34_27860) | 76104..76415 | - | 312 | WP_023222688 | DNA-binding transcriptional regulator | - |
| CHC34_RS26585 (CHC34_27865) | 76415..76753 | - | 339 | WP_154708363 | toxin | - |
| CHC34_RS26590 | 76883..77038 | - | 156 | WP_023222690 | hypothetical protein | - |
| CHC34_RS26595 (CHC34_27870) | 77086..77385 | - | 300 | WP_023222691 | hypothetical protein | - |
| CHC34_RS26600 (CHC34_27880) | 78024..78146 | - | 123 | WP_228374335 | type I toxin-antitoxin system Hok family toxin | - |
| CHC34_RS28455 | 78094..78243 | - | 150 | Protein_83 | DUF5431 family protein | - |
| CHC34_RS26605 (CHC34_27885) | 78401..78727 | - | 327 | WP_023222694 | hypothetical protein | - |