T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 864..26900
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DKC05_RS00895 (DKC05_00960) | 294..824 | + | 531 | WP_047727555 | antirestriction protein | - |
| DKC05_RS00900 (DKC05_00965) | 864..1271 | - | 408 | WP_080346868 | transglycosylase SLT domain-containing protein | virB1 |
| DKC05_RS00905 (DKC05_00970) | 1773..2165 | + | 393 | WP_032736874 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| DKC05_RS00910 | 2404..3105 | + | 702 | WP_032736872 | hypothetical protein | - |
| DKC05_RS00915 (DKC05_00980) | 3190..3390 | + | 201 | WP_060415469 | TraY domain-containing protein | - |
| DKC05_RS00920 (DKC05_00985) | 3459..3827 | + | 369 | WP_032736871 | type IV conjugative transfer system pilin TraA | - |
| DKC05_RS00925 (DKC05_00990) | 3841..4146 | + | 306 | WP_032736870 | type IV conjugative transfer system protein TraL | traL |
| DKC05_RS00930 (DKC05_00995) | 4166..4732 | + | 567 | WP_047727553 | type IV conjugative transfer system protein TraE | traE |
| DKC05_RS00935 (DKC05_01000) | 4719..5453 | + | 735 | WP_032736867 | type-F conjugative transfer system secretin TraK | traK |
| DKC05_RS00940 (DKC05_01005) | 5453..6874 | + | 1422 | WP_032736866 | F-type conjugal transfer pilus assembly protein TraB | traB |
| DKC05_RS00945 | 6867..7028 | + | 162 | WP_154235504 | hypothetical protein | - |
| DKC05_RS00950 (DKC05_01010) | 7048..7617 | + | 570 | WP_042946293 | type IV conjugative transfer system lipoprotein TraV | traV |
| DKC05_RS00955 (DKC05_01015) | 7729..8007 | + | 279 | WP_032736865 | hypothetical protein | - |
| DKC05_RS28725 | 8092..8493 | + | 402 | WP_032736864 | hypothetical protein | - |
| DKC05_RS00965 (DKC05_01025) | 8490..8789 | + | 300 | WP_032736863 | hypothetical protein | - |
| DKC05_RS00970 (DKC05_01030) | 8876..9259 | + | 384 | WP_042946290 | hypothetical protein | - |
| DKC05_RS00975 (DKC05_01035) | 9352..11991 | + | 2640 | WP_032736861 | type IV secretion system protein TraC | virb4 |
| DKC05_RS00980 (DKC05_01040) | 11991..12380 | + | 390 | WP_032736860 | type-F conjugative transfer system protein TrbI | - |
| DKC05_RS00985 (DKC05_01045) | 12377..13003 | + | 627 | WP_042946288 | type-F conjugative transfer system protein TraW | traW |
| DKC05_RS00990 (DKC05_01050) | 13047..14006 | + | 960 | WP_088912317 | conjugal transfer pilus assembly protein TraU | traU |
| DKC05_RS00995 (DKC05_01055) | 14019..14645 | + | 627 | WP_032736857 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| DKC05_RS01000 (DKC05_01060) | 14642..16585 | + | 1944 | WP_032736856 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| DKC05_RS01005 (DKC05_01065) | 16699..17310 | + | 612 | WP_032736855 | hypothetical protein | - |
| DKC05_RS01010 (DKC05_01070) | 17300..17536 | + | 237 | WP_032736854 | conjugal transfer protein TrbE | - |
| DKC05_RS01015 (DKC05_01075) | 17533..17718 | + | 186 | WP_032736852 | hypothetical protein | - |
| DKC05_RS01020 (DKC05_01080) | 17765..18091 | + | 327 | WP_032736851 | hypothetical protein | - |
| DKC05_RS01025 (DKC05_01085) | 18112..18864 | + | 753 | WP_042946285 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| DKC05_RS01030 (DKC05_01090) | 18875..19111 | + | 237 | WP_032736848 | type-F conjugative transfer system pilin chaperone TraQ | - |
| DKC05_RS01035 (DKC05_01095) | 19098..19661 | + | 564 | WP_224250969 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| DKC05_RS01040 (DKC05_01100) | 19648..21018 | + | 1371 | WP_032736846 | conjugal transfer pilus assembly protein TraH | traH |
| DKC05_RS01045 (DKC05_01105) | 21018..23861 | + | 2844 | WP_047727552 | conjugal transfer mating-pair stabilization protein TraG | traG |
| DKC05_RS01050 (DKC05_01110) | 23872..24399 | + | 528 | WP_032736843 | hypothetical protein | - |
| DKC05_RS01055 (DKC05_01115) | 24606..26900 | + | 2295 | WP_032736842 | type IV conjugative transfer system coupling protein TraD | virb4 |