T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 53358..63646
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L1977_RS00265 (pEclC18_058) | 48645..48992 | - | 348 | WP_000679427 | quaternary ammonium compound efflux SMR transporter QacE delta 1 | - |
| L1977_RS00270 (pEclC18_059) | 49196..49669 | - | 474 | WP_032490158 | trimethoprim-resistant dihydrofolate reductase DfrA16 | - |
| L1977_RS00275 (pEclC18_060) | 49825..50838 | + | 1014 | WP_000845048 | class 1 integron integrase IntI1 | - |
| L1977_RS00280 (pEclC18_061) | 51122..51697 | + | 576 | WP_063131942 | recombinase family protein | - |
| L1977_RS00285 | 51850..52203 | - | 354 | WP_162478394 | hypothetical protein | - |
| L1977_RS00290 (pEclC18_064) | 52834..53346 | - | 513 | WP_029697418 | phospholipase D family protein | - |
| L1977_RS00295 (pEclC18_065) | 53358..54359 | - | 1002 | WP_001076634 | ATPase, T2SS/T4P/T4SS family | virB11 |
| L1977_RS00300 (pEclC18_066) | 54410..55543 | - | 1134 | WP_000101920 | type IV secretion system protein VirB10 | virB10 |
| L1977_RS00305 (pEclC18_067) | 55543..56430 | - | 888 | WP_000758230 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| L1977_RS00310 (pEclC18_068) | 56441..57136 | - | 696 | WP_001208352 | type IV secretion system protein | virB8 |
| L1977_RS00395 | 57147..57278 | - | 132 | WP_032493177 | hypothetical protein | - |
| L1977_RS00315 (pEclC18_069) | 57355..58392 | - | 1038 | WP_014014948 | type IV secretion system protein | virB6 |
| L1977_RS00320 (pEclC18_070) | 58409..58651 | - | 243 | WP_000858958 | EexN family lipoprotein | - |
| L1977_RS00325 (pEclC18_071) | 58661..59374 | - | 714 | WP_000644929 | type IV secretion system protein | virB5 |
| L1977_RS00330 (pEclC18_072) | 59390..61963 | - | 2574 | WP_032493176 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| L1977_RS00335 (pEclC18_073) | 61964..62281 | - | 318 | WP_000462629 | type IV secretion system protein VirB3 | virB3 |
| L1977_RS00340 (pEclC18_074) | 62321..62662 | - | 342 | WP_001121032 | TrbC/VirB2 family protein | virB2 |
| L1977_RS00345 (pEclC18_075) | 62864..63646 | - | 783 | WP_024562119 | lytic transglycosylase domain-containing protein | virB1 |
| L1977_RS00350 (pEclC18_077) | 63710..64063 | + | 354 | WP_225988093 | H-NS family nucleoid-associated regulatory protein | - |
| L1977_RS00355 (pEclC18_078) | 64067..64417 | + | 351 | WP_000528713 | hypothetical protein | - |
| L1977_RS00360 | 64396..64752 | + | 357 | WP_014014954 | hypothetical protein | - |
| L1977_RS00365 (pEclC18_080) | 64756..65064 | + | 309 | WP_000733764 | hypothetical protein | - |
| L1977_RS00370 (pEclC18_081) | 65349..65534 | + | 186 | WP_024562121 | ribbon-helix-helix domain-containing protein | - |
| L1977_RS00375 (pEclC18_082) | 65531..66139 | - | 609 | WP_000275218 | recombinase family protein | - |
| L1977_RS00380 (pEclC18_083) | 66305..66637 | - | 333 | WP_000140165 | hypothetical protein | - |