T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 7619..32029
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HTS38_RS00025 (MH257753_0005) | 7619..9799 | - | 2181 | WP_149448732 | type IV conjugative transfer system coupling protein TraD | virb4 |
| HTS38_RS00030 (MH257753_0006) | 9850..10587 | - | 738 | WP_000199900 | hypothetical protein | - |
| HTS38_RS00035 (MH257753_0007) | 10790..11521 | - | 732 | WP_000850424 | conjugal transfer complement resistance protein TraT | - |
| HTS38_RS00040 (MH257753_0008) | 11553..12056 | - | 504 | WP_000605510 | hypothetical protein | - |
| HTS38_RS00045 (MH257753_0009) | 12071..14893 | - | 2823 | WP_172692944 | conjugal transfer mating-pair stabilization protein TraG | traG |
| HTS38_RS00050 (MH257753_0010) | 14890..16266 | - | 1377 | WP_000979534 | conjugal transfer pilus assembly protein TraH | traH |
| HTS38_RS00055 (MH257753_0011) | 16263..16625 | - | 363 | WP_023181029 | P-type conjugative transfer protein TrbJ | - |
| HTS38_RS00060 (MH257753_0012) | 16555..17100 | - | 546 | WP_000052614 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| HTS38_RS00065 (MH257753_0013) | 17087..17371 | - | 285 | WP_000624110 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HTS38_RS00070 (MH257753_0014) | 17490..17837 | - | 348 | WP_001287893 | conjugal transfer protein TrbA | - |
| HTS38_RS00075 (MH257753_0015) | 17853..18596 | - | 744 | WP_001030395 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| HTS38_RS00080 (MH257753_0016) | 18589..18846 | - | 258 | WP_000864311 | conjugal transfer protein TrbE | - |
| HTS38_RS00085 (MH257753_0017) | 18873..20681 | - | 1809 | WP_172692945 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| HTS38_RS00090 (MH257753_0018) | 20678..21274 | - | 597 | WP_234887301 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| HTS38_RS00095 (MH257753_0019) | 21344..21796 | - | 453 | WP_000069428 | hypothetical protein | - |
| HTS38_RS00100 (MH257753_0020) | 21826..22287 | - | 462 | WP_000277845 | hypothetical protein | - |
| HTS38_RS00105 (MH257753_0021) | 22313..23305 | - | 993 | WP_000830839 | conjugal transfer pilus assembly protein TraU | traU |
| HTS38_RS00110 (MH257753_0022) | 23302..23934 | - | 633 | WP_001203720 | type-F conjugative transfer system protein TraW | traW |
| HTS38_RS00115 (MH257753_0023) | 23931..24317 | - | 387 | WP_000214096 | type-F conjugative transfer system protein TrbI | - |
| HTS38_RS00120 (MH257753_0024) | 24314..26941 | - | 2628 | WP_001064243 | type IV secretion system protein TraC | virb4 |
| HTS38_RS00125 (MH257753_0026) | 27101..27322 | - | 222 | WP_001278692 | conjugal transfer protein TraR | - |
| HTS38_RS00130 (MH257753_0027) | 27457..27972 | - | 516 | WP_000809906 | type IV conjugative transfer system lipoprotein TraV | traV |
| HTS38_RS00135 (MH257753_0028) | 27969..28220 | - | 252 | WP_001038341 | conjugal transfer protein TrbG | - |
| HTS38_RS00140 (MH257753_0029) | 28232..28429 | - | 198 | WP_001324648 | conjugal transfer protein TrbD | - |
| HTS38_RS00145 (MH257753_0030) | 28426..28998 | - | 573 | WP_024179131 | conjugal transfer pilus-stabilizing protein TraP | - |
| HTS38_RS00150 (MH257753_0031) | 28988..30415 | - | 1428 | WP_000146685 | F-type conjugal transfer pilus assembly protein TraB | traB |
| HTS38_RS00155 (MH257753_0032) | 30415..31143 | - | 729 | WP_001230787 | type-F conjugative transfer system secretin TraK | traK |
| HTS38_RS00160 (MH257753_0033) | 31130..31696 | - | 567 | WP_000399793 | type IV conjugative transfer system protein TraE | traE |
| HTS38_RS00165 (MH257753_0034) | 31718..32029 | - | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| HTS38_RS00170 (MH257753_0035) | 32034..32396 | - | 363 | WP_033566647 | type IV conjugative transfer system pilin TraA | - |
| HTS38_RS00175 (MH257753_0036) | 32430..32657 | - | 228 | WP_000589558 | conjugal transfer relaxosome protein TraY | - |
| HTS38_RS00180 (MH257753_0037) | 32777..33424 | - | 648 | WP_000338012 | transcriptional regulator TraJ family protein | - |
| HTS38_RS00185 (MH257753_0038) | 33616..33999 | - | 384 | WP_001151530 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| HTS38_RS00190 (MH257753_0039) | 34275..34922 | + | 648 | WP_172692946 | transglycosylase SLT domain-containing protein | - |
| HTS38_RS00195 (MH257753_0041) | 35219..36040 | - | 822 | WP_001234469 | DUF932 domain-containing protein | - |
| HTS38_RS00200 (MH257753_0043) | 36146..36442 | - | 297 | WP_001272240 | hypothetical protein | - |
| HTS38_RS00635 | 36474..36596 | - | 123 | Protein_40 | single-stranded DNA-binding protein | - |
| HTS38_RS00610 (MH257753_0045) | 36666..36962 | + | 297 | Protein_41 | hypothetical protein | - |