T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 196323..203634
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HFR18_RS24380 (HFR18_24385) | 191466..192182 | - | 717 | WP_000838219 | zinc finger-like domain-containing protein | - |
| HFR18_RS24385 (HFR18_24390) | 192179..192379 | - | 201 | WP_000594930 | hypothetical protein | - |
| HFR18_RS24390 (HFR18_24395) | 192399..193451 | - | 1053 | WP_001065778 | hypothetical protein | - |
| HFR18_RS24395 (HFR18_24400) | 193928..194803 | + | 876 | WP_000594611 | RepB family plasmid replication initiator protein | - |
| HFR18_RS24400 (HFR18_24405) | 195952..196305 | + | 354 | WP_000423602 | hypothetical protein | - |
| HFR18_RS24405 (HFR18_24410) | 196323..196673 | + | 351 | WP_001447770 | type IV conjugative transfer system protein TraL | traL |
| HFR18_RS24410 (HFR18_24415) | 196685..197473 | + | 789 | WP_000783153 | TraE/TraK family type IV conjugative transfer system protein | traE |
| HFR18_RS24415 (HFR18_24420) | 197473..198744 | + | 1272 | WP_000592092 | type-F conjugative transfer system secretin TraK | traK |
| HFR18_RS24420 (HFR18_24425) | 198746..199207 | + | 462 | WP_000521242 | plasmid transfer protein HtdO | - |
| HFR18_RS24425 (HFR18_24430) | 199197..200552 | + | 1356 | WP_000351841 | IncHI-type conjugal transfer protein TrhB | traB |
| HFR18_RS24430 (HFR18_24435) | 200560..201042 | + | 483 | WP_000377632 | hypothetical protein | - |
| HFR18_RS24435 (HFR18_24440) | 201161..201913 | + | 753 | WP_182911723 | protein-disulfide isomerase HtdT | - |
| HFR18_RS24440 (HFR18_24445) | 201923..202873 | + | 951 | WP_001022588 | IncHI-type conjugal transfer lipoprotein TrhV | traV |
| HFR18_RS24445 (HFR18_24450) | 202882..203634 | + | 753 | WP_327328788 | TraC family protein | virb4 |
| HFR18_RS24450 (HFR18_24455) | 203613..204821 | - | 1209 | WP_001339197 | IS4-like element ISVsa5 family transposase | - |
| HFR18_RS24455 (HFR18_24460) | 204922..206901 | + | 1980 | Protein_223 | DUF5934 domain-containing protein | - |