T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 19149..58851
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HFT46_RS23590 (HFT46_23595) | 14211..15278 | + | 1068 | WP_000742600 | type IV pilus biogenesis lipoprotein PilL | - |
| HFT46_RS23595 (HFT46_23600) | 15278..15715 | + | 438 | WP_000539807 | type IV pilus biogenesis protein PilM | - |
| HFT46_RS23600 (HFT46_23605) | 15729..17411 | + | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| HFT46_RS23605 (HFT46_23610) | 17404..18699 | + | 1296 | WP_000752774 | type 4b pilus protein PilO2 | - |
| HFT46_RS23610 (HFT46_23615) | 18686..19138 | + | 453 | WP_001247336 | type IV pilus biogenesis protein PilP | - |
| HFT46_RS23615 (HFT46_23620) | 19149..20702 | + | 1554 | WP_000362202 | GspE/PulE family protein | virB11 |
| HFT46_RS23620 (HFT46_23625) | 20715..21812 | + | 1098 | WP_001208805 | type II secretion system F family protein | - |
| HFT46_RS23625 (HFT46_23630) | 21830..22444 | + | 615 | WP_000959785 | type 4 pilus major pilin | - |
| HFT46_RS23630 (HFT46_23635) | 22454..23014 | + | 561 | WP_000014116 | lytic transglycosylase domain-containing protein | virB1 |
| HFT46_RS23635 (HFT46_23640) | 22999..23655 | + | 657 | WP_001193553 | prepilin peptidase | - |
| HFT46_RS23640 (HFT46_23645) | 23655..24947 | + | 1293 | WP_032274560 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| HFT46_RS25935 (HFT46_23650) | 25443..25604 | + | 162 | WP_327328276 | hypothetical protein | - |
| HFT46_RS23650 (HFT46_23655) | 25881..27035 | + | 1155 | WP_001139958 | tyrosine-type recombinase/integrase | - |
| HFT46_RS23655 (HFT46_23660) | 27186..28010 | + | 825 | WP_202190922 | conjugal transfer protein TraE | traE |
| HFT46_RS23660 (HFT46_23665) | 28096..29298 | + | 1203 | WP_000976353 | conjugal transfer protein TraF | - |
| HFT46_RS23665 (HFT46_23670) | 29358..29942 | + | 585 | WP_000977517 | histidine phosphatase family protein | - |
| HFT46_RS23670 (HFT46_23675) | 30337..30795 | + | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| HFT46_RS23675 (HFT46_23680) | 30792..31610 | + | 819 | WP_000646097 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| HFT46_RS23680 (HFT46_23685) | 31607..32755 | + | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| HFT46_RS23685 (HFT46_23690) | 32752..33042 | + | 291 | WP_001299214 | hypothetical protein | traK |
| HFT46_RS23690 (HFT46_23695) | 33057..33608 | + | 552 | WP_000014584 | phospholipase D family protein | - |
| HFT46_RS23695 (HFT46_23700) | 33698..37465 | + | 3768 | WP_001141535 | LPD7 domain-containing protein | - |
| HFT46_RS23700 (HFT46_23705) | 37483..37830 | + | 348 | WP_001055900 | conjugal transfer protein | traL |
| HFT46_RS23705 (HFT46_23710) | 37827..38519 | + | 693 | WP_000138552 | DotI/IcmL family type IV secretion protein | traM |
| HFT46_RS23710 (HFT46_23715) | 38530..39513 | + | 984 | WP_001191878 | IncI1-type conjugal transfer protein TraN | traN |
| HFT46_RS23715 (HFT46_23720) | 39516..40805 | + | 1290 | WP_001271997 | conjugal transfer protein TraO | traO |
| HFT46_RS23720 (HFT46_23725) | 40805..41509 | + | 705 | WP_000801920 | IncI1-type conjugal transfer protein TraP | traP |
| HFT46_RS23725 (HFT46_23730) | 41509..42036 | + | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| HFT46_RS23730 (HFT46_23735) | 42087..42491 | + | 405 | WP_000086960 | IncI1-type conjugal transfer protein TraR | traR |
| HFT46_RS23735 (HFT46_23740) | 42555..42743 | + | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| HFT46_RS23740 (HFT46_23745) | 42727..43527 | + | 801 | WP_001164788 | IncI1-type conjugal transfer protein TraT | traT |
| HFT46_RS23745 (HFT46_23750) | 43617..46661 | + | 3045 | WP_001024751 | IncI1-type conjugal transfer protein TraU | traU |
| HFT46_RS23750 (HFT46_23755) | 46661..47275 | + | 615 | WP_000337394 | IncI1-type conjugal transfer protein TraV | traV |
| HFT46_RS23755 (HFT46_23760) | 47242..48444 | + | 1203 | WP_001189158 | IncI1-type conjugal transfer protein TraW | traW |
| HFT46_RS23760 (HFT46_23765) | 48473..49057 | + | 585 | WP_001037998 | conjugal transfer protein TraX | - |
| HFT46_RS23765 (HFT46_23770) | 49154..51322 | + | 2169 | WP_000698368 | DotA/TraY family protein | traY |
| HFT46_RS23770 (HFT46_23775) | 51393..52055 | + | 663 | WP_000644794 | plasmid IncI1-type surface exclusion protein ExcA | - |
| HFT46_RS23775 (HFT46_23780) | 52127..52336 | - | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
| HFT46_RS23780 (HFT46_23785) | 52728..52904 | + | 177 | WP_001054900 | hypothetical protein | - |
| HFT46_RS23785 (HFT46_23790) | 53625..54647 | + | 1023 | WP_001572805 | IS21-like element IS100 family transposase | - |
| HFT46_RS23790 (HFT46_23795) | 54644..55426 | + | 783 | WP_001300609 | IS21-like element IS100kyp family helper ATPase IstB | - |
| HFT46_RS23795 (HFT46_23800) | 55787..56038 | + | 252 | WP_001291965 | hypothetical protein | - |
| HFT46_RS23800 (HFT46_23805) | 56110..56262 | - | 153 | WP_001303307 | Hok/Gef family protein | - |
| HFT46_RS23805 (HFT46_23810) | 56554..57762 | + | 1209 | WP_000121273 | IncI1-type conjugal transfer protein TrbA | trbA |
| HFT46_RS23810 (HFT46_23815) | 57781..58851 | + | 1071 | WP_000151575 | IncI1-type conjugal transfer protein TrbB | trbB |
| HFT46_RS23815 (HFT46_23820) | 58844..61135 | + | 2292 | WP_001289271 | F-type conjugative transfer protein TrbC | - |