T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 3778..12985
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CFSAN004025_RS24170 (CFSAN004025_24485) | 1..876 | + | 876 | WP_000594611 | RepB family plasmid replication initiator protein | - |
| CFSAN004025_RS24180 (CFSAN004025_24495) | 2025..2378 | + | 354 | WP_000423602 | hypothetical protein | - |
| CFSAN004025_RS24185 (CFSAN004025_24500) | 2583..3695 | - | 1113 | WP_001300563 | IS4-like element IS421 family transposase | - |
| CFSAN004025_RS24190 (CFSAN004025_24505) | 3778..4095 | + | 318 | WP_000043358 | type IV conjugative transfer system protein TraL | traL |
| CFSAN004025_RS24195 (CFSAN004025_24510) | 4107..4895 | + | 789 | WP_000783153 | TraE/TraK family type IV conjugative transfer system protein | traE |
| CFSAN004025_RS24200 (CFSAN004025_24515) | 4895..6166 | + | 1272 | WP_000592092 | type-F conjugative transfer system secretin TraK | traK |
| CFSAN004025_RS24205 (CFSAN004025_24520) | 6168..6629 | + | 462 | WP_000521242 | plasmid transfer protein HtdO | - |
| CFSAN004025_RS24210 (CFSAN004025_24525) | 6619..7974 | + | 1356 | WP_000351841 | IncHI-type conjugal transfer protein TrhB | traB |
| CFSAN004025_RS24215 (CFSAN004025_24530) | 7982..8464 | + | 483 | WP_000377632 | hypothetical protein | - |
| CFSAN004025_RS24220 (CFSAN004025_24535) | 8583..9335 | + | 753 | WP_182911723 | protein-disulfide isomerase HtdT | - |
| CFSAN004025_RS24225 (CFSAN004025_24540) | 9345..10295 | + | 951 | WP_001022588 | IncHI-type conjugal transfer lipoprotein TrhV | traV |
| CFSAN004025_RS24230 (CFSAN004025_24545) | 10304..12985 | + | 2682 | WP_000387412 | TraC family protein | virb4 |
| CFSAN004025_RS26365 | 15534..15695 | + | 162 | WP_001371949 | hypothetical protein | - |