T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 3778..12985
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RCF37_RS22140 (RCF37_22140) | 1..876 | + | 876 | WP_000594611 | RepB family plasmid replication initiator protein | - |
| RCF37_RS22145 (RCF37_22145) | 2025..2378 | + | 354 | WP_000423602 | hypothetical protein | - |
| RCF37_RS22150 (RCF37_22150) | 2583..3695 | - | 1113 | WP_001615628 | IS4-like element IS421 family transposase | - |
| RCF37_RS22155 (RCF37_22155) | 3778..4095 | + | 318 | WP_000043358 | type IV conjugative transfer system protein TraL | traL |
| RCF37_RS22160 (RCF37_22160) | 4107..4895 | + | 789 | WP_000783153 | TraE/TraK family type IV conjugative transfer system protein | traE |
| RCF37_RS22165 (RCF37_22165) | 4895..6166 | + | 1272 | WP_000592092 | type-F conjugative transfer system secretin TraK | traK |
| RCF37_RS22170 (RCF37_22170) | 6168..6629 | + | 462 | WP_000521242 | plasmid transfer protein HtdO | - |
| RCF37_RS22175 (RCF37_22175) | 6619..7974 | + | 1356 | WP_000351841 | IncHI-type conjugal transfer protein TrhB | traB |
| RCF37_RS22180 (RCF37_22180) | 7982..8464 | + | 483 | WP_000377632 | hypothetical protein | - |
| RCF37_RS22185 (RCF37_22185) | 8583..9335 | + | 753 | WP_182911723 | protein-disulfide isomerase HtdT | - |
| RCF37_RS22190 (RCF37_22190) | 9345..10295 | + | 951 | WP_001022588 | IncHI-type conjugal transfer lipoprotein TrhV | traV |
| RCF37_RS22195 (RCF37_22195) | 10304..12985 | + | 2682 | WP_000387412 | TraC family protein | virb4 |
| RCF37_RS22200 (RCF37_22200) | 15534..15695 | + | 162 | WP_001371949 | hypothetical protein | - |