T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 19128..37087
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D1I00_RS16725 (D1I00_16720) | 14518..15051 | + | 534 | WP_120130580 | hypothetical protein | - |
| D1I00_RS16730 (D1I00_16725) | 15020..15787 | - | 768 | WP_120130581 | VUT family protein | - |
| D1I00_RS16735 (D1I00_16730) | 15771..16430 | - | 660 | WP_120130582 | S24 family peptidase | - |
| D1I00_RS16740 (D1I00_16735) | 16629..16871 | + | 243 | WP_120130583 | TraY domain-containing protein | - |
| D1I00_RS16745 (D1I00_16740) | 16849..17928 | + | 1080 | WP_120130584 | replication protein | - |
| D1I00_RS16750 (D1I00_16745) | 17962..18705 | + | 744 | WP_120130585 | complement resistance protein TraT | - |
| D1I00_RS16755 (D1I00_16750) | 18827..19114 | + | 288 | WP_120130586 | hypothetical protein | - |
| D1I00_RS16760 (D1I00_16755) | 19128..19424 | + | 297 | WP_120130587 | type IV conjugative transfer system protein TraL | traL |
| D1I00_RS16765 (D1I00_16760) | 19434..20003 | + | 570 | WP_120130588 | type IV conjugative transfer system protein TraE | traE |
| D1I00_RS16770 (D1I00_16765) | 19996..20712 | + | 717 | WP_120130589 | type-F conjugative transfer system secretin TraK | traK |
| D1I00_RS16775 (D1I00_16770) | 20705..22078 | + | 1374 | WP_120130590 | TrbI/VirB10 family protein | traB |
| D1I00_RS16780 (D1I00_16775) | 22075..22365 | + | 291 | WP_120130591 | TraV family lipoprotein | traV |
| D1I00_RS16785 (D1I00_16780) | 22356..24944 | + | 2589 | WP_120130592 | type IV secretion system protein TraC | virb4 |
| D1I00_RS16790 (D1I00_16785) | 24941..25279 | + | 339 | WP_241030152 | type-F conjugative transfer system protein TrbI | - |
| D1I00_RS16795 (D1I00_16790) | 25285..25911 | + | 627 | WP_241030155 | type-F conjugative transfer system protein TraW | traW |
| D1I00_RS16800 (D1I00_16795) | 25901..26884 | + | 984 | WP_120130595 | conjugal transfer pilus assembly protein TraU | traU |
| D1I00_RS16805 (D1I00_16800) | 26898..27314 | + | 417 | WP_120130596 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| D1I00_RS16810 (D1I00_16805) | 27311..29017 | + | 1707 | WP_120130597 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| D1I00_RS16815 (D1I00_16810) | 29010..29753 | + | 744 | WP_120130598 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| D1I00_RS16820 (D1I00_16815) | 29750..30262 | + | 513 | WP_241030153 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| D1I00_RS16825 (D1I00_16820) | 30259..31623 | + | 1365 | WP_120130600 | conjugal transfer protein TraH | traH |
| D1I00_RS16830 (D1I00_16825) | 31636..34467 | + | 2832 | WP_120130601 | conjugal transfer mating-pair stabilization protein TraG | traG |
| D1I00_RS16835 (D1I00_16830) | 34467..35222 | + | 756 | WP_241030154 | hypothetical protein | - |
| D1I00_RS16840 (D1I00_16835) | 35222..37087 | + | 1866 | WP_120130603 | type IV conjugative transfer system coupling protein TraD | virb4 |
| D1I00_RS16845 (D1I00_16840) | 37171..37788 | - | 618 | WP_120130604 | hypothetical protein | - |
| D1I00_RS16850 (D1I00_16845) | 37799..40468 | - | 2670 | WP_120130605 | Ti-type conjugative transfer relaxase TraA | - |
| D1I00_RS16860 (D1I00_16855) | 40695..40991 | + | 297 | WP_120130607 | mobilization protein | - |
| D1I00_RS17065 | 41007..41264 | + | 258 | WP_133305313 | hypothetical protein | - |
| D1I00_RS16865 (D1I00_16860) | 41333..41512 | + | 180 | WP_242450266 | hypothetical protein | - |