T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 49964..78474
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HS396_RS00275 (D616_p81058) | 45281..45868 | + | 588 | Protein_54 | hypothetical protein | - |
| HS396_RS00280 (D616_p81059) | 45937..46370 | + | 434 | Protein_55 | conjugation system SOS inhibitor PsiB | - |
| HS396_RS00285 (D616_p81060) | 46367..47129 | + | 763 | Protein_56 | plasmid SOS inhibition protein A | - |
| HS396_RS00580 | 47308..47457 | + | 150 | Protein_57 | plasmid maintenance protein Mok | - |
| HS396_RS00290 (D616_p81064) | 47399..47524 | + | 126 | WP_001372321 | type I toxin-antitoxin system Hok family toxin | - |
| HS396_RS00295 (D616_p81063) | 47843..48139 | - | 297 | Protein_59 | hypothetical protein | - |
| HS396_RS00300 (D616_p81065) | 48439..48735 | + | 297 | WP_001272251 | hypothetical protein | - |
| HS396_RS00305 (D616_p81066) | 48846..49667 | + | 822 | WP_001234445 | DUF932 domain-containing protein | - |
| HS396_RS00310 (D616_p81069) | 49964..50566 | - | 603 | WP_000243713 | transglycosylase SLT domain-containing protein | virB1 |
| HS396_RS00315 (D616_p81068) | 50889..51272 | + | 384 | WP_001354030 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| HS396_RS00320 (D616_p81070) | 51466..52137 | + | 672 | WP_000283561 | conjugal transfer transcriptional regulator TraJ | - |
| HS396_RS00325 (D616_p81071) | 52274..52501 | + | 228 | WP_000089263 | conjugal transfer relaxosome protein TraY | - |
| HS396_RS00330 (D616_p81072) | 52534..52893 | + | 360 | WP_001098992 | type IV conjugative transfer system pilin TraA | - |
| HS396_RS00335 (D616_p81073) | 52908..53219 | + | 312 | WP_000012113 | type IV conjugative transfer system protein TraL | traL |
| HS396_RS00340 (D616_p81075) | 53241..53807 | + | 567 | WP_000399780 | type IV conjugative transfer system protein TraE | traE |
| HS396_RS00345 (D616_p81074) | 53794..54522 | + | 729 | WP_001230772 | type-F conjugative transfer system secretin TraK | traK |
| HS396_RS00350 (D616_p81076) | 54522..55973 | + | 1452 | WP_000146675 | F-type conjugal transfer pilus assembly protein TraB | traB |
| HS396_RS00355 (D616_p81078) | 55963..56529 | + | 567 | WP_000896599 | conjugal transfer pilus-stabilizing protein TraP | - |
| HS396_RS00360 (D616_p81077) | 56516..56836 | + | 321 | WP_001057307 | conjugal transfer protein TrbD | - |
| HS396_RS00365 (D616_p81079) | 56833..57348 | + | 516 | WP_000809881 | type IV conjugative transfer system lipoprotein TraV | traV |
| HS396_RS00370 (D616_p81080) | 57483..57704 | + | 222 | WP_001278683 | conjugal transfer protein TraR | - |
| HS396_RS00375 (D616_p81081) | 57697..58110 | + | 414 | WP_000549589 | hypothetical protein | - |
| HS396_RS00380 (D616_p81082) | 58103..58576 | + | 474 | WP_000549568 | hypothetical protein | - |
| HS396_RS00385 (D616_p81083) | 58656..58874 | + | 219 | WP_000556745 | hypothetical protein | - |
| HS396_RS00390 (D616_p81084) | 58902..59249 | + | 348 | WP_000836682 | hypothetical protein | - |
| HS396_RS00395 (D616_p81085) | 59375..62005 | + | 2631 | WP_000069777 | type IV secretion system protein TraC | virb4 |
| HS396_RS00400 (D616_p81086) | 62002..62388 | + | 387 | WP_000214084 | type-F conjugative transfer system protein TrbI | - |
| HS396_RS00405 (D616_p81087) | 62385..63017 | + | 633 | WP_001203728 | type-F conjugative transfer system protein TraW | traW |
| HS396_RS00410 (D616_p81088) | 63014..64006 | + | 993 | WP_000830838 | conjugal transfer pilus assembly protein TraU | traU |
| HS396_RS00415 (D616_p81089) | 64036..64341 | + | 306 | WP_000224416 | hypothetical protein | - |
| HS396_RS00420 (D616_p81090) | 64350..64988 | + | 639 | WP_001080256 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| HS396_RS00425 (D616_p81091) | 64985..66835 | + | 1851 | WP_000821856 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| HS396_RS00430 (D616_p81092) | 66862..67119 | + | 258 | WP_000864353 | conjugal transfer protein TrbE | - |
| HS396_RS00435 (D616_p81093) | 67112..67855 | + | 744 | WP_001030371 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| HS396_RS00440 (D616_p81094) | 67869..68213 | + | 345 | WP_000556796 | conjugal transfer protein TrbA | - |
| HS396_RS00445 (D616_p81095) | 68332..68616 | + | 285 | WP_000624194 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HS396_RS00450 (D616_p81096) | 68603..69148 | + | 546 | WP_000059831 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| HS396_RS00455 (D616_p81097) | 69078..69425 | + | 348 | WP_001309242 | P-type conjugative transfer protein TrbJ | - |
| HS396_RS00460 (D616_p81098) | 69406..69798 | + | 393 | WP_000660699 | F-type conjugal transfer protein TrbF | - |
| HS396_RS00465 (D616_p81099) | 69785..71158 | + | 1374 | WP_000944331 | conjugal transfer pilus assembly protein TraH | traH |
| HS396_RS00470 (D616_p81100) | 71155..73977 | + | 2823 | WP_001007039 | conjugal transfer mating-pair stabilization protein TraG | traG |
| HS396_RS00475 (D616_p81101) | 73993..74478 | + | 486 | WP_000605870 | hypothetical protein | - |
| HS396_RS00480 (D616_p81102) | 74527..75258 | + | 732 | WP_000782451 | conjugal transfer complement resistance protein TraT | - |
| HS396_RS00485 (D616_p81104) | 75461..76198 | + | 738 | WP_000199905 | hypothetical protein | - |
| HS396_RS00490 (D616_p81103) | 76249..78474 | + | 2226 | WP_011867779 | type IV conjugative transfer system coupling protein TraD | virb4 |