T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 8168..20940
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SLH58_RS00025 (NPEBAHHM_00004) | 3972..6083 | + | 2112 | Protein_4 | Tn3-like element Tn3 family transposase | - |
| SLH58_RS00030 (NPEBAHHM_00005) | 6103..6663 | - | 561 | Protein_5 | IS6-like element IS26 family transposase | - |
| SLH58_RS00035 (NPEBAHHM_00006) | 6728..6907 | - | 180 | Protein_6 | helix-turn-helix domain-containing protein | - |
| SLH58_RS00040 | 7174..7461 | + | 288 | Protein_7 | DUF6710 family protein | - |
| SLH58_RS00045 (NPEBAHHM_00007) | 7635..8168 | - | 534 | WP_000792636 | phospholipase D family protein | - |
| SLH58_RS00050 (NPEBAHHM_00008) | 8168..9163 | - | 996 | WP_000128596 | ATPase, T2SS/T4P/T4SS family | virB11 |
| SLH58_RS00055 (NPEBAHHM_00009) | 9205..10365 | - | 1161 | WP_000101710 | type IV secretion system protein VirB10 | virB10 |
| SLH58_RS00060 (NPEBAHHM_00010) | 10365..11111 | - | 747 | Protein_11 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| SLH58_RS00065 (NPEBAHHM_00011) | 11149..12687 | - | 1539 | WP_016808813 | IS66 family transposase | - |
| SLH58_RS00070 (NPEBAHHM_00012) | 12737..13084 | - | 348 | WP_004114612 | IS66 family insertion sequence element accessory protein TnpB | - |
| SLH58_RS00075 (NPEBAHHM_00013) | 13081..13458 | - | 378 | WP_004118218 | transposase | - |
| SLH58_RS00080 (NPEBAHHM_00014) | 13550..13696 | - | 147 | Protein_15 | conjugal transfer protein TraO | - |
| SLH58_RS00085 (NPEBAHHM_00015) | 13707..14405 | - | 699 | WP_000646594 | virB8 family protein | virB8 |
| SLH58_RS00090 | 14395..14553 | - | 159 | WP_012561180 | hypothetical protein | - |
| SLH58_RS00095 (NPEBAHHM_00016) | 14624..15664 | - | 1041 | WP_001749958 | type IV secretion system protein | virB6 |
| SLH58_RS00100 (NPEBAHHM_00017) | 15680..15907 | - | 228 | WP_001749959 | IncN-type entry exclusion lipoprotein EexN | - |
| SLH58_RS00105 (NPEBAHHM_00018) | 15915..16679 | - | 765 | WP_013149461 | type IV secretion system protein | virB5 |
| SLH58_RS00110 (NPEBAHHM_00019) | 16646..19246 | - | 2601 | WP_001749961 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| SLH58_RS00115 (NPEBAHHM_00020) | 19246..19563 | - | 318 | WP_000496058 | VirB3 family type IV secretion system protein | virB3 |
| SLH58_RS00120 (NPEBAHHM_00021) | 19613..19906 | - | 294 | WP_001749962 | hypothetical protein | virB2 |
| SLH58_RS00125 (NPEBAHHM_00022) | 19916..20197 | - | 282 | WP_000440698 | transcriptional repressor KorA | - |
| SLH58_RS00130 (NPEBAHHM_00023) | 20206..20940 | - | 735 | WP_001749963 | lytic transglycosylase domain-containing protein | virB1 |
| SLH58_RS00135 (NPEBAHHM_00024) | 20983..21354 | + | 372 | WP_011867773 | H-NS family nucleoid-associated regulatory protein | - |
| SLH58_RS00140 (NPEBAHHM_00025) | 21370..21714 | + | 345 | WP_001749964 | hypothetical protein | - |
| SLH58_RS00145 (NPEBAHHM_00026) | 21711..22025 | + | 315 | WP_001749965 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| SLH58_RS00150 (NPEBAHHM_00027) | 22139..22372 | + | 234 | WP_001191790 | hypothetical protein | - |
| SLH58_RS00155 (NPEBAHHM_00028) | 22422..23069 | + | 648 | WP_012561184 | restriction endonuclease | - |
| SLH58_RS00160 (NPEBAHHM_00029) | 23074..23280 | + | 207 | WP_001749967 | hypothetical protein | - |
| SLH58_RS00165 (NPEBAHHM_00030) | 23291..23563 | - | 273 | Protein_32 | IS1 family transposase | - |
| SLH58_RS00170 (NPEBAHHM_00031) | 23662..25095 | + | 1434 | WP_001288432 | DNA cytosine methyltransferase | - |