T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 1..18794
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9303_RS28195 (C9303_28245) | 1..319 | - | 319 | WP_197733270 | conjugal transfer protein TraH | traH |
| C9303_RS28200 (C9303_28250) | 306..698 | - | 393 | WP_000660703 | F-type conjugal transfer protein TrbF | - |
| C9303_RS28205 (C9303_28255) | 679..1020 | - | 342 | WP_001448115 | P-type conjugative transfer protein TrbJ | - |
| C9303_RS28210 (C9303_28260) | 950..1495 | - | 546 | WP_000059824 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| C9303_RS28215 (C9303_28265) | 1482..1766 | - | 285 | WP_001448202 | type-F conjugative transfer system pilin chaperone TraQ | - |
| C9303_RS28220 (C9303_28270) | 1893..2231 | - | 339 | WP_001287905 | conjugal transfer protein TrbA | - |
| C9303_RS28225 (C9303_28275) | 2247..2990 | - | 744 | WP_001030371 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| C9303_RS28230 (C9303_28280) | 2983..3240 | - | 258 | WP_000864320 | conjugal transfer protein TrbE | - |
| C9303_RS28235 (C9303_28285) | 3267..5075 | - | 1809 | WP_000821863 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| C9303_RS28240 (C9303_28290) | 5072..5710 | - | 639 | WP_001080257 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| C9303_RS28245 (C9303_28295) | 5719..6024 | - | 306 | WP_000224411 | hypothetical protein | - |
| C9303_RS28250 (C9303_28300) | 6054..7046 | - | 993 | WP_000830838 | conjugal transfer pilus assembly protein TraU | traU |
| C9303_RS28255 (C9303_28305) | 7043..7675 | - | 633 | WP_001203720 | type-F conjugative transfer system protein TraW | traW |
| C9303_RS28260 (C9303_28310) | 7672..8058 | - | 387 | WP_000214082 | type-F conjugative transfer system protein TrbI | - |
| C9303_RS28265 (C9303_28315) | 8055..10682 | - | 2628 | WP_001064239 | type IV secretion system protein TraC | virb4 |
| C9303_RS28270 (C9303_28320) | 10842..11063 | - | 222 | WP_001278978 | conjugal transfer protein TraR | - |
| C9303_RS28275 (C9303_28325) | 11198..11713 | - | 516 | WP_000809893 | type IV conjugative transfer system lipoprotein TraV | traV |
| C9303_RS28280 (C9303_28330) | 11710..11961 | - | 252 | WP_001038341 | conjugal transfer protein TrbG | - |
| C9303_RS28285 (C9303_28335) | 11954..12274 | - | 321 | WP_001057302 | conjugal transfer protein TrbD | virb4 |
| C9303_RS28290 (C9303_28340) | 12261..12845 | - | 585 | WP_000002795 | conjugal transfer pilus-stabilizing protein TraP | - |
| C9303_RS28295 (C9303_28345) | 12835..14262 | - | 1428 | WP_000146638 | F-type conjugal transfer pilus assembly protein TraB | traB |
| C9303_RS28300 (C9303_28350) | 14262..14990 | - | 729 | WP_001230787 | type-F conjugative transfer system secretin TraK | traK |
| C9303_RS28305 (C9303_28355) | 14977..15543 | - | 567 | WP_000399804 | type IV conjugative transfer system protein TraE | traE |
| C9303_RS28310 (C9303_28360) | 15565..15876 | - | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| C9303_RS28315 (C9303_28365) | 15881..16243 | - | 363 | WP_001098998 | type IV conjugative transfer system pilin TraA | - |
| C9303_RS28320 (C9303_28370) | 16277..16504 | - | 228 | WP_001254388 | conjugal transfer relaxosome protein TraY | - |
| C9303_RS28325 (C9303_28375) | 16598..17284 | - | 687 | WP_000332487 | PAS domain-containing protein | - |
| C9303_RS28330 (C9303_28380) | 17478..17861 | - | 384 | WP_001151564 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| C9303_RS28335 (C9303_28385) | 18147..18794 | + | 648 | WP_000614282 | transglycosylase SLT domain-containing protein | virB1 |
| C9303_RS28340 (C9303_28390) | 19091..19912 | - | 822 | WP_001234469 | DUF932 domain-containing protein | - |
| C9303_RS28345 (C9303_28395) | 20033..20320 | - | 288 | WP_000107537 | hypothetical protein | - |
| C9303_RS31975 | 20618..20791 | + | 174 | Protein_31 | hypothetical protein | - |