T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 171144..201123
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SH589_RS27540 (SH589_27545) | 171144..173456 | - | 2313 | WP_013214038 | type IV conjugative transfer system coupling protein TraD | virb4 |
| SH589_RS27545 (SH589_27550) | 173583..174272 | - | 690 | WP_014343485 | hypothetical protein | - |
| SH589_RS27550 (SH589_27555) | 174465..175196 | - | 732 | WP_013214036 | conjugal transfer complement resistance protein TraT | - |
| SH589_RS27555 (SH589_27560) | 175448..176050 | - | 603 | WP_013214035 | conjugal transfer protein TraS | - |
| SH589_RS27560 (SH589_27565) | 176073..178895 | - | 2823 | WP_013214034 | conjugal transfer mating-pair stabilization protein TraG | traG |
| SH589_RS27565 (SH589_27570) | 178895..180274 | - | 1380 | WP_074160414 | conjugal transfer pilus assembly protein TraH | traH |
| SH589_RS27570 (SH589_27575) | 180252..180695 | - | 444 | WP_013214032 | F-type conjugal transfer protein TrbF | - |
| SH589_RS27575 (SH589_27580) | 180741..181298 | - | 558 | WP_013214031 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| SH589_RS27580 (SH589_27585) | 181270..181509 | - | 240 | WP_004144400 | type-F conjugative transfer system pilin chaperone TraQ | - |
| SH589_RS27585 (SH589_27590) | 181520..182272 | - | 753 | WP_004152677 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| SH589_RS27590 (SH589_27595) | 182293..182619 | - | 327 | WP_013214030 | hypothetical protein | - |
| SH589_RS27595 (SH589_27600) | 182632..182880 | - | 249 | WP_013214029 | hypothetical protein | - |
| SH589_RS27600 (SH589_27605) | 182858..183112 | - | 255 | WP_004152674 | conjugal transfer protein TrbE | - |
| SH589_RS27605 (SH589_27610) | 183144..185099 | - | 1956 | WP_032448279 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| SH589_RS27610 (SH589_27615) | 185158..185805 | - | 648 | WP_015632510 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| SH589_RS27615 (SH589_27620) | 186081..187070 | - | 990 | WP_032439620 | conjugal transfer pilus assembly protein TraU | traU |
| SH589_RS27620 (SH589_27625) | 187067..187468 | - | 402 | WP_016831047 | hypothetical protein | - |
| SH589_RS27625 (SH589_27630) | 187503..188138 | - | 636 | WP_020325113 | type-F conjugative transfer system protein TraW | traW |
| SH589_RS27630 (SH589_27635) | 188138..188527 | - | 390 | WP_004167468 | type-F conjugative transfer system protein TrbI | - |
| SH589_RS27635 (SH589_27640) | 188527..191166 | - | 2640 | WP_032448278 | type IV secretion system protein TraC | virb4 |
| SH589_RS27640 (SH589_27645) | 191238..191636 | - | 399 | WP_023158008 | hypothetical protein | - |
| SH589_RS27645 (SH589_27650) | 191644..192033 | - | 390 | WP_065799586 | hypothetical protein | - |
| SH589_RS27650 (SH589_27655) | 192076..192480 | - | 405 | WP_016831042 | hypothetical protein | - |
| SH589_RS27655 (SH589_27660) | 192547..192859 | - | 313 | Protein_196 | hypothetical protein | - |
| SH589_RS27660 (SH589_27665) | 192860..193078 | - | 219 | WP_014386199 | hypothetical protein | - |
| SH589_RS27665 (SH589_27670) | 193038..193352 | - | 315 | WP_032448277 | hypothetical protein | - |
| SH589_RS27670 (SH589_27675) | 193357..193767 | - | 411 | WP_014386197 | hypothetical protein | - |
| SH589_RS27675 (SH589_27680) | 193898..194482 | - | 585 | WP_014386196 | type IV conjugative transfer system lipoprotein TraV | traV |
| SH589_RS27680 (SH589_27685) | 194529..195101 | - | 573 | WP_014386195 | conjugal transfer pilus-stabilizing protein TraP | - |
| SH589_RS27685 (SH589_27690) | 195094..196518 | - | 1425 | WP_014386194 | F-type conjugal transfer pilus assembly protein TraB | traB |
| SH589_RS27690 (SH589_27695) | 196518..197258 | - | 741 | WP_014386193 | type-F conjugative transfer system secretin TraK | traK |
| SH589_RS27695 (SH589_27700) | 197245..197811 | - | 567 | WP_004152602 | type IV conjugative transfer system protein TraE | traE |
| SH589_RS27700 (SH589_27705) | 197831..198136 | - | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| SH589_RS27705 (SH589_27710) | 198150..198518 | - | 369 | WP_004194426 | type IV conjugative transfer system pilin TraA | - |
| SH589_RS27710 (SH589_27715) | 198580..198786 | - | 207 | WP_171773970 | TraY domain-containing protein | - |
| SH589_RS27715 (SH589_27720) | 198919..199638 | - | 720 | WP_014386192 | conjugal transfer protein | - |
| SH589_RS27720 (SH589_27725) | 199831..200247 | - | 417 | WP_072145360 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| SH589_RS27725 (SH589_27730) | 200638..201123 | + | 486 | WP_004178063 | transglycosylase SLT domain-containing protein | virB1 |
| SH589_RS27730 (SH589_27735) | 201156..201485 | - | 330 | WP_014386191 | DUF5983 family protein | - |
| SH589_RS27735 (SH589_27740) | 201518..202339 | - | 822 | WP_004182076 | DUF932 domain-containing protein | - |
| SH589_RS27740 (SH589_27745) | 203172..203585 | - | 414 | WP_013023817 | type II toxin-antitoxin system HigA family antitoxin | - |
| SH589_RS27745 (SH589_27750) | 203586..203864 | - | 279 | WP_004152721 | helix-turn-helix transcriptional regulator | - |
| SH589_RS27750 (SH589_27755) | 203854..204174 | - | 321 | WP_004152720 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| SH589_RS27755 (SH589_27760) | 204255..204479 | - | 225 | WP_014386189 | hypothetical protein | - |
| SH589_RS27760 (SH589_27765) | 204490..204702 | - | 213 | WP_014386188 | hypothetical protein | - |
| SH589_RS27765 (SH589_27770) | 204764..205090 | - | 327 | WP_014386187 | hypothetical protein | - |