T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 57217..85813
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CS368_RS07335 (CS368_07300) | 57217..59529 | - | 2313 | WP_046664209 | type IV conjugative transfer system coupling protein TraD | virb4 |
| CS368_RS25600 | 59658..60347 | - | 690 | WP_172448744 | hypothetical protein | - |
| CS368_RS07345 (CS368_07310) | 60540..61271 | - | 732 | WP_016831056 | conjugal transfer complement resistance protein TraT | - |
| CS368_RS07350 (CS368_07315) | 61522..62124 | - | 603 | WP_013214035 | conjugal transfer protein TraS | - |
| CS368_RS07355 (CS368_07320) | 62147..64969 | - | 2823 | WP_101455613 | conjugal transfer mating-pair stabilization protein TraG | traG |
| CS368_RS07360 (CS368_07325) | 64969..66348 | - | 1380 | WP_072198320 | conjugal transfer pilus assembly protein TraH | traH |
| CS368_RS07365 (CS368_07330) | 66326..66769 | - | 444 | WP_101455614 | F-type conjugal transfer protein TrbF | - |
| CS368_RS07370 (CS368_07335) | 66815..67372 | - | 558 | WP_013214031 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| CS368_RS07375 (CS368_07340) | 67344..67583 | - | 240 | WP_004144400 | type-F conjugative transfer system pilin chaperone TraQ | - |
| CS368_RS07380 (CS368_07345) | 67594..68346 | - | 753 | WP_101455615 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| CS368_RS07385 (CS368_07350) | 68367..68693 | - | 327 | WP_004144402 | hypothetical protein | - |
| CS368_RS07390 (CS368_07355) | 68706..68954 | - | 249 | WP_101455616 | hypothetical protein | - |
| CS368_RS07395 (CS368_07360) | 68932..69186 | - | 255 | WP_004152674 | conjugal transfer protein TrbE | - |
| CS368_RS07400 (CS368_07365) | 69218..71173 | - | 1956 | WP_101455617 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| CS368_RS07405 (CS368_07370) | 71232..71870 | - | 639 | WP_015065635 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| CS368_RS07410 (CS368_07375) | 71883..72872 | - | 990 | WP_029497420 | conjugal transfer pilus assembly protein TraU | traU |
| CS368_RS07415 (CS368_07380) | 72869..73270 | - | 402 | WP_004194979 | hypothetical protein | - |
| CS368_RS07420 (CS368_07385) | 73305..73940 | - | 636 | WP_020325113 | type-F conjugative transfer system protein TraW | traW |
| CS368_RS07425 (CS368_07390) | 73940..74329 | - | 390 | WP_020803372 | type-F conjugative transfer system protein TrbI | - |
| CS368_RS07430 (CS368_07395) | 74329..76968 | - | 2640 | WP_013214024 | type IV secretion system protein TraC | virb4 |
| CS368_RS07435 (CS368_07400) | 77040..77438 | - | 399 | WP_023179972 | hypothetical protein | - |
| CS368_RS25835 | 77620..77772 | - | 153 | WP_224518895 | hypothetical protein | - |
| CS368_RS07445 (CS368_07410) | 77815..78219 | - | 405 | WP_004197817 | hypothetical protein | - |
| CS368_RS07450 (CS368_07415) | 78286..78597 | - | 312 | WP_029497417 | hypothetical protein | - |
| CS368_RS07455 (CS368_07420) | 78598..78816 | - | 219 | WP_004195468 | hypothetical protein | - |
| CS368_RS07460 (CS368_07425) | 79139..79723 | - | 585 | WP_040120377 | type IV conjugative transfer system lipoprotein TraV | traV |
| CS368_RS07465 (CS368_07430) | 79796..81220 | - | 1425 | WP_040228261 | F-type conjugal transfer pilus assembly protein TraB | traB |
| CS368_RS07470 (CS368_07435) | 81220..81960 | - | 741 | WP_064169777 | type-F conjugative transfer system secretin TraK | traK |
| CS368_RS07475 (CS368_07440) | 81947..82513 | - | 567 | WP_064161971 | type IV conjugative transfer system protein TraE | traE |
| CS368_RS07480 (CS368_07445) | 82533..82838 | - | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| CS368_RS07485 (CS368_07450) | 82852..83220 | - | 369 | WP_004194426 | type IV conjugative transfer system pilin TraA | - |
| CS368_RS07490 (CS368_07455) | 83288..83488 | - | 201 | WP_046664192 | TraY domain-containing protein | - |
| CS368_RS07495 (CS368_07460) | 83573..84274 | - | 702 | WP_004194113 | hypothetical protein | - |
| CS368_RS07500 (CS368_07465) | 84504..84896 | - | 393 | WP_004194114 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| CS368_RS07505 (CS368_07470) | 85328..85813 | + | 486 | WP_001568108 | transglycosylase SLT domain-containing protein | virB1 |
| CS368_RS07510 (CS368_07475) | 85846..86175 | - | 330 | WP_011977736 | DUF5983 family protein | - |
| CS368_RS07515 (CS368_07480) | 86208..87029 | - | 822 | WP_101455618 | DUF932 domain-containing protein | - |
| CS368_RS07525 (CS368_07495) | 87845..88678 | - | 834 | WP_032445769 | N-6 DNA methylase | - |
| CS368_RS07530 (CS368_07500) | 88729..88875 | - | 147 | WP_004152750 | hypothetical protein | - |
| CS368_RS07535 (CS368_07505) | 88970..89317 | - | 348 | WP_032445771 | hypothetical protein | - |
| CS368_RS07540 (CS368_07510) | 89384..89764 | - | 381 | WP_020802391 | hypothetical protein | - |