T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 26746..51041
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CK504_RS27490 (CK504_027510) | 22712..24932 | - | 2221 | Protein_19 | type IV secretion system DNA-binding domain-containing protein | - |
| CK504_RS27495 (CK504_027515) | 25292..26023 | - | 732 | WP_004152629 | conjugal transfer complement resistance protein TraT | - |
| CK504_RS27500 (CK504_027520) | 26213..26740 | - | 528 | WP_004153030 | hypothetical protein | - |
| CK504_RS27505 (CK504_027525) | 26746..29595 | - | 2850 | WP_004178054 | conjugal transfer mating-pair stabilization protein TraG | traG |
| CK504_RS27510 (CK504_027530) | 29595..30965 | - | 1371 | WP_004178055 | conjugal transfer pilus assembly protein TraH | traH |
| CK504_RS27515 (CK504_027535) | 30952..31380 | - | 429 | WP_004152689 | hypothetical protein | - |
| CK504_RS27520 (CK504_027540) | 31373..31945 | - | 573 | WP_004152688 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| CK504_RS27525 (CK504_027545) | 31917..32156 | - | 240 | WP_004152687 | type-F conjugative transfer system pilin chaperone TraQ | - |
| CK504_RS27530 (CK504_027550) | 32167..32919 | - | 753 | WP_004152686 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| CK504_RS27535 (CK504_027555) | 32940..33266 | - | 327 | WP_004152685 | hypothetical protein | - |
| CK504_RS29280 (CK504_027560) | 33312..33497 | - | 186 | WP_004152684 | hypothetical protein | - |
| CK504_RS27545 (CK504_027565) | 33494..33730 | - | 237 | WP_004152683 | conjugal transfer protein TrbE | - |
| CK504_RS27550 (CK504_027570) | 33762..35717 | - | 1956 | WP_004153093 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| CK504_RS27555 (CK504_027575) | 35765..36403 | - | 639 | WP_004152682 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| CK504_RS27560 (CK504_027580) | 36416..37375 | - | 960 | WP_015065634 | conjugal transfer pilus assembly protein TraU | traU |
| CK504_RS27565 (CK504_027585) | 37419..38045 | - | 627 | WP_004152590 | type-F conjugative transfer system protein TraW | traW |
| CK504_RS27570 (CK504_027590) | 38045..38434 | - | 390 | WP_004152591 | type-F conjugative transfer system protein TrbI | - |
| CK504_RS27575 (CK504_027595) | 38434..41073 | - | 2640 | WP_004152592 | type IV secretion system protein TraC | virb4 |
| CK504_RS27580 (CK504_027600) | 41145..41543 | - | 399 | WP_004153071 | hypothetical protein | - |
| CK504_RS27590 (CK504_027610) | 41839..42243 | - | 405 | WP_004152594 | hypothetical protein | - |
| CK504_RS27595 (CK504_027615) | 42310..42627 | - | 318 | WP_004152595 | hypothetical protein | - |
| CK504_RS27600 (CK504_027620) | 42628..42846 | - | 219 | WP_004171484 | hypothetical protein | - |
| CK504_RS27605 (CK504_027625) | 42870..43160 | - | 291 | WP_004152596 | hypothetical protein | - |
| CK504_RS27610 (CK504_027630) | 43165..43575 | - | 411 | WP_004152597 | lipase chaperone | - |
| CK504_RS27615 (CK504_027635) | 43707..44276 | - | 570 | WP_004152598 | type IV conjugative transfer system lipoprotein TraV | traV |
| CK504_RS27620 (CK504_027640) | 44299..44895 | - | 597 | WP_004152599 | conjugal transfer pilus-stabilizing protein TraP | - |
| CK504_RS27625 (CK504_027645) | 44888..46312 | - | 1425 | WP_004152600 | F-type conjugal transfer pilus assembly protein TraB | traB |
| CK504_RS27630 (CK504_027650) | 46312..47052 | - | 741 | WP_004152601 | type-F conjugative transfer system secretin TraK | traK |
| CK504_RS27635 (CK504_027655) | 47039..47605 | - | 567 | WP_004152602 | type IV conjugative transfer system protein TraE | traE |
| CK504_RS27640 (CK504_027660) | 47625..47930 | - | 306 | WP_004178059 | type IV conjugative transfer system protein TraL | traL |
| CK504_RS27645 (CK504_027665) | 47944..48312 | - | 369 | WP_004178060 | type IV conjugative transfer system pilin TraA | - |
| CK504_RS27650 (CK504_027670) | 48366..48737 | - | 372 | WP_004208838 | TraY domain-containing protein | - |
| CK504_RS27655 (CK504_027675) | 48821..49516 | - | 696 | WP_004178061 | transcriptional regulator TraJ family protein | - |
| CK504_RS27660 (CK504_027680) | 49730..50122 | - | 393 | WP_004178062 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| CK504_RS27665 (CK504_027685) | 50556..51041 | + | 486 | WP_004178063 | transglycosylase SLT domain-containing protein | virB1 |
| CK504_RS27670 (CK504_027690) | 51074..51403 | - | 330 | WP_011977736 | DUF5983 family protein | - |
| CK504_RS27675 (CK504_027695) | 51436..52257 | - | 822 | WP_004178064 | DUF932 domain-containing protein | - |
| CK504_RS27695 (CK504_027715) | 52992..53405 | - | 414 | WP_004152722 | helix-turn-helix domain-containing protein | - |
| CK504_RS27700 (CK504_027720) | 53406..53684 | - | 279 | WP_004152721 | helix-turn-helix transcriptional regulator | - |
| CK504_RS27705 (CK504_027725) | 53674..53994 | - | 321 | WP_004152720 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CK504_RS27710 (CK504_027730) | 54075..54299 | - | 225 | WP_004152719 | hypothetical protein | - |
| CK504_RS27715 (CK504_027735) | 54310..54522 | - | 213 | WP_004152718 | hypothetical protein | - |
| CK504_RS27720 (CK504_027740) | 54583..54939 | - | 357 | WP_004152717 | hypothetical protein | - |
| CK504_RS27725 (CK504_027745) | 55446..55763 | - | 318 | WP_004118473 | hypothetical protein | - |