T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 12402..50695
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CK504_RS26640 (CK504_026660) | 7464..8531 | + | 1068 | WP_054170954 | type IV pilus biogenesis lipoprotein PilL | - |
| CK504_RS26645 (CK504_026665) | 8531..8968 | + | 438 | WP_000539811 | type IV pilus biogenesis protein PilM | - |
| CK504_RS26650 (CK504_026670) | 8982..10664 | + | 1683 | WP_054170956 | PilN family type IVB pilus formation outer membrane protein | - |
| CK504_RS26655 (CK504_026675) | 10657..11952 | + | 1296 | WP_000752780 | type 4b pilus protein PilO2 | - |
| CK504_RS26660 (CK504_026680) | 11939..12391 | + | 453 | WP_001247337 | type IV pilus biogenesis protein PilP | - |
| CK504_RS26665 (CK504_026685) | 12402..13955 | + | 1554 | WP_000362206 | ATPase, T2SS/T4P/T4SS family | virB11 |
| CK504_RS26670 (CK504_026690) | 13968..15053 | + | 1086 | WP_054170959 | type II secretion system F family protein | - |
| CK504_RS26675 (CK504_026695) | 15070..15684 | + | 615 | WP_000908226 | type 4 pilus major pilin | - |
| CK504_RS26680 (CK504_026700) | 15694..16254 | + | 561 | WP_000014005 | lytic transglycosylase domain-containing protein | virB1 |
| CK504_RS26685 (CK504_026705) | 16239..16895 | + | 657 | WP_001193549 | A24 family peptidase | - |
| CK504_RS26690 (CK504_026710) | 16883..18319 | + | 1437 | WP_015058206 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| CK504_RS29250 (CK504_026715) | 18316..18537 | - | 222 | Protein_19 | prepilin | - |
| CK504_RS26730 (CK504_026750) | 19953..21107 | + | 1155 | WP_001139955 | site-specific integrase | - |
| CK504_RS26735 (CK504_026755) | 21258..22082 | + | 825 | WP_001690630 | conjugal transfer protein TraE | traE |
| CK504_RS26740 (CK504_026760) | 22168..23370 | + | 1203 | WP_000976353 | conjugal transfer protein TraF | - |
| CK504_RS26745 (CK504_026765) | 23430..24014 | + | 585 | WP_000977525 | histidine phosphatase family protein | - |
| CK504_RS26750 (CK504_026770) | 24409..24867 | + | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| CK504_RS26755 (CK504_026775) | 24864..25682 | + | 819 | WP_032220737 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| CK504_RS26760 (CK504_026780) | 25679..26827 | + | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| CK504_RS26765 (CK504_026785) | 26824..27114 | + | 291 | WP_001299214 | hypothetical protein | traK |
| CK504_RS26770 (CK504_026790) | 27129..27680 | + | 552 | WP_000014586 | phospholipase D family protein | - |
| CK504_RS26775 (CK504_026795) | 27770..31534 | + | 3765 | WP_021497833 | LPD7 domain-containing protein | - |
| CK504_RS26780 (CK504_026800) | 31552..31899 | + | 348 | WP_001055900 | conjugal transfer protein | traL |
| CK504_RS26785 (CK504_026805) | 31896..32588 | + | 693 | WP_000138551 | DotI/IcmL family type IV secretion protein | traM |
| CK504_RS26790 (CK504_026810) | 32599..33582 | + | 984 | WP_052938673 | IncI1-type conjugal transfer protein TraN | traN |
| CK504_RS26795 (CK504_026815) | 33585..34874 | + | 1290 | WP_001271991 | conjugal transfer protein TraO | traO |
| CK504_RS26800 (CK504_026820) | 34874..35578 | + | 705 | WP_060614393 | IncI1-type conjugal transfer protein TraP | traP |
| CK504_RS26805 (CK504_026825) | 35578..36105 | + | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| CK504_RS26810 (CK504_026830) | 36156..36560 | + | 405 | WP_021497835 | IncI1-type conjugal transfer protein TraR | traR |
| CK504_RS26815 (CK504_026835) | 36624..36812 | + | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| CK504_RS26820 (CK504_026840) | 36796..37596 | + | 801 | WP_021497829 | IncI1-type conjugal transfer protein TraT | traT |
| CK504_RS26825 (CK504_026845) | 37686..40730 | + | 3045 | WP_001024782 | IncI1-type conjugal transfer protein TraU | traU |
| CK504_RS26830 (CK504_026850) | 40730..41344 | + | 615 | WP_000337399 | IncI1-type conjugal transfer protein TraV | traV |
| CK504_RS26835 (CK504_026855) | 41311..42513 | + | 1203 | WP_001189156 | IncI1-type conjugal transfer protein TraW | traW |
| CK504_RS26840 (CK504_026860) | 42542..43126 | + | 585 | WP_001476649 | IncI1-type conjugal transfer protein TraX | - |
| CK504_RS26845 (CK504_026865) | 43223..45391 | + | 2169 | WP_054170920 | DotA/TraY family protein | traY |
| CK504_RS26850 (CK504_026870) | 45465..46115 | + | 651 | WP_001178506 | plasmid IncI1-type surface exclusion protein ExcA | - |
| CK504_RS26855 (CK504_026875) | 46187..46396 | - | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
| CK504_RS28750 | 46796..46972 | + | 177 | WP_001054898 | hypothetical protein | - |
| CK504_RS29215 | 47037..47132 | - | 96 | WP_001303310 | DinQ-like type I toxin DqlB | - |
| CK504_RS26860 (CK504_026880) | 47631..47882 | + | 252 | WP_001291964 | hypothetical protein | - |
| CK504_RS26865 (CK504_026885) | 47954..48106 | - | 153 | WP_001387489 | Hok/Gef family protein | - |
| CK504_RS26870 (CK504_026890) | 48398..49606 | + | 1209 | WP_000121273 | IncI1-type conjugal transfer protein TrbA | trbA |
| CK504_RS26875 (CK504_026895) | 49625..50695 | + | 1071 | WP_000151583 | IncI1-type conjugal transfer protein TrbB | trbB |
| CK504_RS26880 (CK504_026900) | 50688..52979 | + | 2292 | WP_021497839 | F-type conjugative transfer protein TrbC | - |