T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 157955..167341
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HS649_RS00725 (pRi2659_p120) | 153168..154424 | + | 1257 | WP_234886495 | cytochrome P450 | - |
| HS649_RS00730 (pRi2659_p121) | 154628..157183 | + | 2556 | WP_012476029 | two-component system VirA-like sensor kinase | - |
| HS649_RS00735 | 157256..157498 | - | 243 | WP_077768110 | hypothetical protein | - |
| HS649_RS00740 (pRi2659_p122) | 157955..158677 | + | 723 | WP_010900342 | type IV secretion system lytic transglycosylase VirB1 | virB1 |
| HS649_RS00745 (pRi2659_p123) | 158677..159042 | + | 366 | WP_010900343 | pilin major subunit VirB2 | virB2 |
| HS649_RS00750 (pRi2659_p124) | 159039..159365 | + | 327 | WP_010900344 | type IV secretion system protein VirB3 | virB3 |
| HS649_RS00755 (pRi2659_p125) | 159365..161734 | + | 2370 | WP_012476030 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| HS649_RS00760 (pRi2659_p126) | 161751..162419 | + | 669 | WP_012476031 | pilin minor subunit VirB5 | traI |
| HS649_RS00765 (pRi2659_p127) | 162486..163373 | + | 888 | WP_010900347 | type IV secretion system protein | virB6 |
| HS649_RS00770 (pRi2659_p128) | 163401..163568 | + | 168 | WP_010900348 | type IV secretion system lipoprotein VirB7 | - |
| HS649_RS00775 (pRi2659_p129) | 163555..164268 | + | 714 | WP_012476032 | type IV secretion system protein VirB8 | virB8 |
| HS649_RS00780 (pRi2659_p130) | 164265..165143 | + | 879 | WP_012476033 | P-type conjugative transfer protein VirB9 | virB9 |
| HS649_RS00785 (pRi2659_p131) | 165143..166273 | + | 1131 | WP_012476034 | type IV secretion system protein VirB10 | virB10 |
| HS649_RS00790 (pRi2659_p132) | 166307..167341 | + | 1035 | WP_012476035 | P-type DNA transfer ATPase VirB11 | virB11 |
| HS649_RS00795 (pRi2659_p133) | 167613..168302 | + | 690 | WP_234888146 | winged helix-turn-helix domain-containing protein | - |
| HS649_RS00800 | 168336..169112 | - | 777 | Protein_161 | IS5 family transposase | - |
| HS649_RS00805 (pRi2659_p136) | 169270..169875 | - | 606 | WP_010900354 | conjugal transfer protein VirC2 | - |
| HS649_RS00810 (pRi2659_p137) | 169878..170573 | - | 696 | WP_012476039 | conjugal transfer ATPase VirC1 | - |
| HS649_RS00815 (pRi2659_p138) | 170828..171274 | + | 447 | WP_012476040 | T-DNA border endonuclease subunit VirD1 | - |