T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 8425..30216
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D1A27_RS01050 (D1A27_01050) | 4188..4883 | - | 696 | WP_254910806 | RepA family replication protein | - |
| D1A27_RS29025 | 5389..5640 | - | 252 | WP_113394424 | hypothetical protein | - |
| D1A27_RS01055 (D1A27_01055) | 5652..6185 | - | 534 | WP_032440594 | phospholipase D family protein | - |
| D1A27_RS01060 (D1A27_01060) | 6231..8423 | - | 2193 | WP_032440593 | F-type conjugative transfer protein TrbC | - |
| D1A27_RS01065 (D1A27_01065) | 8425..9516 | - | 1092 | WP_050597336 | thioredoxin fold domain-containing protein | trbB |
| D1A27_RS01070 (D1A27_01070) | 9527..10945 | - | 1419 | WP_063666705 | hypothetical protein | trbA |
| D1A27_RS01075 (D1A27_01075) | 11047..11670 | - | 624 | WP_032440592 | plasmid IncI1-type surface exclusion protein ExcA | - |
| D1A27_RS01080 (D1A27_01080) | 11736..13880 | - | 2145 | WP_032440591 | DotA/TraY family protein | traY |
| D1A27_RS01085 (D1A27_01085) | 13922..14503 | - | 582 | WP_050597335 | conjugal transfer protein TraX | - |
| D1A27_RS01090 (D1A27_01090) | 14500..15696 | - | 1197 | WP_032440590 | conjugal transfer protein TraW | traW |
| D1A27_RS01095 (D1A27_01095) | 15706..18753 | - | 3048 | WP_032440589 | conjugal transfer protein | traU |
| D1A27_RS29030 | 18763..19326 | - | 564 | WP_045325070 | hypothetical protein | traT |
| D1A27_RS01105 (D1A27_01105) | 19370..19771 | - | 402 | WP_032440588 | DUF6750 family protein | traR |
| D1A27_RS01110 (D1A27_01110) | 19827..20360 | - | 534 | WP_032440587 | conjugal transfer protein TraQ | traQ |
| D1A27_RS01115 (D1A27_01115) | 20370..21089 | - | 720 | WP_050597333 | conjugal transfer protein TraP | traP |
| D1A27_RS01120 (D1A27_01120) | 21096..22436 | - | 1341 | WP_032440586 | conjugal transfer protein TraO | traO |
| D1A27_RS01125 (D1A27_01125) | 22440..23543 | - | 1104 | WP_077264204 | DotH/IcmK family type IV secretion protein | traN |
| D1A27_RS01130 (D1A27_01130) | 23554..24222 | - | 669 | WP_032440585 | DotI/IcmL/TraM family protein | traM |
| D1A27_RS01135 (D1A27_01135) | 24294..24647 | - | 354 | WP_032440584 | hypothetical protein | traL |
| D1A27_RS29230 | 24681..27758 | - | 3078 | WP_172583156 | LPD7 domain-containing protein | - |
| D1A27_RS01145 (D1A27_01145) | 27970..28236 | - | 267 | WP_032440577 | IcmT/TraK family protein | traK |
| D1A27_RS01150 (D1A27_01150) | 28233..29420 | - | 1188 | WP_077255878 | plasmid transfer ATPase TraJ | - |
| D1A27_RS01155 (D1A27_01155) | 29398..30216 | - | 819 | WP_032440576 | type IV secretory system conjugative DNA transfer family protein | traI |
| D1A27_RS01160 (D1A27_01160) | 30213..30677 | - | 465 | WP_225546581 | DotD/TraH family lipoprotein | - |
| D1A27_RS01165 (D1A27_01165) | 30703..31182 | - | 480 | WP_032440574 | lytic transglycosylase domain-containing protein | - |
| D1A27_RS01170 (D1A27_01170) | 31914..32141 | - | 228 | WP_032440573 | hypothetical protein | - |
| D1A27_RS01175 (D1A27_01175) | 32751..33593 | + | 843 | WP_032440572 | helix-turn-helix domain-containing protein | - |
| D1A27_RS01180 (D1A27_01180) | 33653..34582 | + | 930 | WP_032440581 | hypothetical protein | - |
| D1A27_RS01185 (D1A27_01185) | 34575..35069 | + | 495 | WP_032440571 | molybdopterin-dependent oxidoreductase | - |