T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 21486..49904
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CK488_RS27030 (CK488_26935) | 21486..23795 | - | 2310 | WP_004152630 | type IV conjugative transfer system coupling protein TraD | virb4 |
| CK488_RS27035 (CK488_26940) | 24155..24886 | - | 732 | WP_004152629 | conjugal transfer complement resistance protein TraT | - |
| CK488_RS27040 (CK488_26945) | 25076..25603 | - | 528 | WP_004153030 | hypothetical protein | - |
| CK488_RS27045 (CK488_26950) | 25609..28458 | - | 2850 | WP_004178054 | conjugal transfer mating-pair stabilization protein TraG | traG |
| CK488_RS27050 (CK488_26955) | 28458..29828 | - | 1371 | WP_004178055 | conjugal transfer pilus assembly protein TraH | traH |
| CK488_RS27055 (CK488_26960) | 29815..30243 | - | 429 | WP_004152689 | hypothetical protein | - |
| CK488_RS27060 (CK488_26965) | 30236..30808 | - | 573 | WP_004152688 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| CK488_RS27065 (CK488_26970) | 30780..31019 | - | 240 | WP_004152687 | type-F conjugative transfer system pilin chaperone TraQ | - |
| CK488_RS27070 (CK488_26975) | 31030..31782 | - | 753 | WP_004152686 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| CK488_RS27075 (CK488_26980) | 31803..32129 | - | 327 | WP_004152685 | hypothetical protein | - |
| CK488_RS29775 (CK488_26985) | 32175..32360 | - | 186 | WP_004152684 | hypothetical protein | - |
| CK488_RS27085 (CK488_26990) | 32357..32593 | - | 237 | WP_004152683 | conjugal transfer protein TrbE | - |
| CK488_RS27090 (CK488_26995) | 32625..34580 | - | 1956 | WP_004153093 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| CK488_RS27095 (CK488_27000) | 34628..35266 | - | 639 | WP_004152682 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| CK488_RS27100 (CK488_27005) | 35279..36238 | - | 960 | WP_015065634 | conjugal transfer pilus assembly protein TraU | traU |
| CK488_RS27105 (CK488_27010) | 36282..36908 | - | 627 | WP_094387712 | type-F conjugative transfer system protein TraW | traW |
| CK488_RS27110 (CK488_27015) | 36908..37297 | - | 390 | WP_004152591 | type-F conjugative transfer system protein TrbI | - |
| CK488_RS27115 (CK488_27020) | 37297..39936 | - | 2640 | WP_004152592 | type IV secretion system protein TraC | virb4 |
| CK488_RS27120 (CK488_27025) | 40008..40406 | - | 399 | WP_004153071 | hypothetical protein | - |
| CK488_RS27130 (CK488_27035) | 40702..41106 | - | 405 | WP_004152594 | hypothetical protein | - |
| CK488_RS27135 (CK488_27040) | 41173..41490 | - | 318 | WP_004152595 | hypothetical protein | - |
| CK488_RS27140 (CK488_27045) | 41491..41709 | - | 219 | WP_004171484 | hypothetical protein | - |
| CK488_RS27145 (CK488_27050) | 41733..42023 | - | 291 | WP_004152596 | hypothetical protein | - |
| CK488_RS27150 (CK488_27055) | 42028..42438 | - | 411 | WP_004152597 | lipase chaperone | - |
| CK488_RS27155 (CK488_27060) | 42570..43139 | - | 570 | WP_004152598 | type IV conjugative transfer system lipoprotein TraV | traV |
| CK488_RS27160 (CK488_27065) | 43162..43758 | - | 597 | WP_004152599 | conjugal transfer pilus-stabilizing protein TraP | - |
| CK488_RS27165 (CK488_27070) | 43751..45175 | - | 1425 | WP_004152600 | F-type conjugal transfer pilus assembly protein TraB | traB |
| CK488_RS27170 (CK488_27075) | 45175..45915 | - | 741 | WP_004152601 | type-F conjugative transfer system secretin TraK | traK |
| CK488_RS27175 (CK488_27080) | 45902..46468 | - | 567 | WP_004152602 | type IV conjugative transfer system protein TraE | traE |
| CK488_RS27180 (CK488_27085) | 46488..46793 | - | 306 | WP_004178059 | type IV conjugative transfer system protein TraL | traL |
| CK488_RS27185 (CK488_27090) | 46807..47175 | - | 369 | WP_004178060 | type IV conjugative transfer system pilin TraA | - |
| CK488_RS27190 (CK488_27095) | 47229..47600 | - | 372 | WP_004208838 | TraY domain-containing protein | - |
| CK488_RS27195 (CK488_27100) | 47684..48379 | - | 696 | WP_004178061 | transcriptional regulator TraJ family protein | - |
| CK488_RS27200 (CK488_27105) | 48593..48985 | - | 393 | WP_004178062 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| CK488_RS27205 (CK488_27110) | 49419..49904 | + | 486 | WP_004178063 | transglycosylase SLT domain-containing protein | virB1 |
| CK488_RS27210 (CK488_27115) | 49937..50266 | - | 330 | WP_011977736 | DUF5983 family protein | - |
| CK488_RS27215 (CK488_27120) | 50299..51120 | - | 822 | WP_004178064 | DUF932 domain-containing protein | - |
| CK488_RS27235 (CK488_27140) | 51718..52131 | - | 414 | WP_004152722 | helix-turn-helix domain-containing protein | - |
| CK488_RS27240 (CK488_27145) | 52132..52410 | - | 279 | WP_004152721 | helix-turn-helix transcriptional regulator | - |
| CK488_RS27245 (CK488_27150) | 52400..52720 | - | 321 | WP_004152720 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CK488_RS27250 (CK488_27155) | 52801..53025 | - | 225 | WP_004152719 | hypothetical protein | - |
| CK488_RS27255 (CK488_27160) | 53036..53248 | - | 213 | WP_004152718 | hypothetical protein | - |
| CK488_RS27260 (CK488_27165) | 53309..53665 | - | 357 | WP_004152717 | hypothetical protein | - |
| CK488_RS27265 (CK488_27170) | 53824..54174 | - | 351 | WP_004152758 | hypothetical protein | - |
| CK488_RS27270 (CK488_27175) | 54171..54443 | - | 273 | WP_004152759 | hypothetical protein | - |