T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 54607..73935
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SLH58_RS00330 (MIMLGBCH_00064) | 49693..50004 | + | 312 | WP_004187333 | hypothetical protein | - |
| SLH58_RS00335 (MIMLGBCH_00065) | 50136..50672 | + | 537 | WP_011091066 | hypothetical protein | - |
| SLH58_RS00340 (MIMLGBCH_00067) | 51173..51568 | - | 396 | WP_020805633 | hypothetical protein | - |
| SLH58_RS00345 | 51567..52130 | + | 564 | WP_319382137 | plasmid mobilization protein MobA | - |
| SLH58_RS00350 (MIMLGBCH_00069) | 52117..54096 | + | 1980 | WP_004187323 | TraI/MobA(P) family conjugative relaxase | - |
| SLH58_RS00355 (MIMLGBCH_00070) | 54110..54610 | + | 501 | WP_004187320 | DotD/TraH family lipoprotein | - |
| SLH58_RS00360 (MIMLGBCH_00071) | 54607..55386 | + | 780 | WP_004187315 | type IV secretory system conjugative DNA transfer family protein | traI |
| SLH58_RS00365 (MIMLGBCH_00072) | 55397..56560 | + | 1164 | WP_020805653 | plasmid transfer ATPase TraJ | virB11 |
| SLH58_RS00370 (MIMLGBCH_00073) | 56550..56810 | + | 261 | WP_004187310 | IcmT/TraK family protein | traK |
| SLH58_RS00375 (MIMLGBCH_00074) | 56835..60272 | + | 3438 | WP_319382138 | LPD7 domain-containing protein | - |
| SLH58_RS00380 (MIMLGBCH_00075) | 60196..60750 | + | 555 | WP_011154467 | hypothetical protein | traL |
| SLH58_RS00385 (MIMLGBCH_00076) | 60751..60948 | - | 198 | WP_004187464 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| SLH58_RS00390 (MIMLGBCH_00077) | 60935..61345 | - | 411 | WP_004187465 | H-NS family nucleoid-associated regulatory protein | - |
| SLH58_RS00395 (MIMLGBCH_00078) | 61344..62126 | + | 783 | WP_004206929 | DotI/IcmL family type IV secretion protein | traM |
| SLH58_RS00400 (MIMLGBCH_00079) | 62162..63286 | + | 1125 | WP_319382139 | DotH/IcmK family type IV secretion protein | traN |
| SLH58_RS00405 (MIMLGBCH_00080) | 63298..64647 | + | 1350 | WP_020805691 | conjugal transfer protein TraO | traO |
| SLH58_RS00410 (MIMLGBCH_00081) | 64659..65363 | + | 705 | WP_020805696 | conjugal transfer protein TraP | traP |
| SLH58_RS00415 (MIMLGBCH_00082) | 65387..65917 | + | 531 | WP_011091077 | conjugal transfer protein TraQ | traQ |
| SLH58_RS00420 (MIMLGBCH_00083) | 65934..66323 | + | 390 | WP_020805690 | DUF6750 family protein | traR |
| SLH58_RS00425 (MIMLGBCH_00084) | 66369..66863 | + | 495 | WP_223294957 | hypothetical protein | - |
| SLH58_RS00430 (MIMLGBCH_00085) | 66860..69910 | + | 3051 | WP_020805687 | ATPase AAA | traU |
| SLH58_RS00435 (MIMLGBCH_00086) | 69940..71115 | + | 1176 | WP_167577398 | conjugal transfer protein TraW | traW |
| SLH58_RS00440 (MIMLGBCH_00087) | 71112..71762 | + | 651 | WP_032426814 | hypothetical protein | - |
| SLH58_RS00445 (MIMLGBCH_00088) | 71755..73935 | + | 2181 | WP_032426815 | DotA/TraY family protein | traY |
| SLH58_RS00450 (MIMLGBCH_00089) | 73938..74591 | + | 654 | WP_020805693 | hypothetical protein | - |
| SLH58_RS00455 (MIMLGBCH_00090) | 74653..74895 | + | 243 | WP_023893611 | IncL/M type plasmid replication protein RepC | - |