T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 11903..39245
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J3S88_RS24840 (J3S88_24700) | 6987..7298 | + | 312 | WP_004187333 | hypothetical protein | - |
| J3S88_RS24845 (J3S88_24705) | 7431..7967 | + | 537 | WP_004187332 | hypothetical protein | - |
| J3S88_RS24850 (J3S88_24710) | 8469..8864 | - | 396 | WP_019725163 | hypothetical protein | - |
| J3S88_RS24855 | 8899..9426 | + | 528 | WP_172740549 | plasmid mobilization protein MobA | - |
| J3S88_RS24860 (J3S88_24720) | 9413..11392 | + | 1980 | WP_004187323 | TraI/MobA(P) family conjugative relaxase | - |
| J3S88_RS24865 (J3S88_24725) | 11406..11906 | + | 501 | WP_004187320 | DotD/TraH family lipoprotein | - |
| J3S88_RS24870 (J3S88_24730) | 11903..12682 | + | 780 | WP_004187315 | type IV secretory system conjugative DNA transfer family protein | traI |
| J3S88_RS24875 (J3S88_24735) | 12693..13856 | + | 1164 | WP_004187313 | plasmid transfer ATPase TraJ | virB11 |
| J3S88_RS24880 (J3S88_24740) | 13846..14106 | + | 261 | WP_004187310 | IcmT/TraK family protein | traK |
| J3S88_RS24885 | 14131..17568 | + | 3438 | WP_015586048 | LPD7 domain-containing protein | - |
| J3S88_RS24890 (J3S88_24750) | 17534..18046 | + | 513 | WP_011091071 | hypothetical protein | traL |
| J3S88_RS24895 (J3S88_24755) | 18047..18259 | - | 213 | WP_305953721 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| J3S88_RS24900 (J3S88_24760) | 18231..18641 | - | 411 | WP_004187465 | H-NS family nucleoid-associated regulatory protein | - |
| J3S88_RS24905 (J3S88_24765) | 18709..19422 | + | 714 | WP_004187467 | DotI/IcmL family type IV secretion protein | traM |
| J3S88_RS24910 (J3S88_24770) | 19431..20582 | + | 1152 | WP_004187471 | DotH/IcmK family type IV secretion protein | traN |
| J3S88_RS24915 (J3S88_24775) | 20594..21943 | + | 1350 | WP_004187474 | conjugal transfer protein TraO | traO |
| J3S88_RS24920 (J3S88_24780) | 21955..22659 | + | 705 | WP_015060002 | conjugal transfer protein TraP | traP |
| J3S88_RS24925 (J3S88_24785) | 22683..23213 | + | 531 | WP_004187478 | conjugal transfer protein TraQ | traQ |
| J3S88_RS24930 (J3S88_24790) | 23230..23619 | + | 390 | WP_004187479 | DUF6750 family protein | traR |
| J3S88_RS24935 (J3S88_24795) | 23665..24159 | + | 495 | WP_004187480 | hypothetical protein | - |
| J3S88_RS24940 (J3S88_24800) | 24633..27206 | + | 2574 | WP_227640156 | conjugal transfer protein | traU |
| J3S88_RS24945 (J3S88_24805) | 27203..28411 | + | 1209 | WP_011091082 | conjugal transfer protein TraW | traW |
| J3S88_RS24950 (J3S88_24810) | 28408..29004 | + | 597 | WP_015060003 | hypothetical protein | - |
| J3S88_RS24955 (J3S88_24815) | 28997..31192 | + | 2196 | WP_015062834 | DotA/TraY family protein | traY |
| J3S88_RS24960 (J3S88_24820) | 31194..31847 | + | 654 | WP_015060005 | hypothetical protein | - |
| J3S88_RS24965 (J3S88_24825) | 31928..32158 | + | 231 | WP_011091085 | IncL/M type plasmid replication protein RepC | - |
| J3S88_RS24970 (J3S88_24830) | 32454..33509 | + | 1056 | WP_015060006 | plasmid replication initiator RepA | - |
| J3S88_RS29585 | 34731..34826 | + | 96 | WP_004206884 | DinQ-like type I toxin DqlB | - |
| J3S88_RS24975 (J3S88_24835) | 34877..36964 | - | 2088 | WP_004206885 | conjugal transfer protein TrbC | - |
| J3S88_RS24980 (J3S88_24840) | 36977..37927 | - | 951 | WP_004206886 | DsbC family protein | trbB |
| J3S88_RS24985 (J3S88_24845) | 37938..39245 | - | 1308 | WP_015059988 | hypothetical protein | trbA |
| J3S88_RS24990 (J3S88_24850) | 39245..39640 | - | 396 | WP_004187436 | lytic transglycosylase domain-containing protein | - |
| J3S88_RS24995 (J3S88_24855) | 39745..40095 | - | 351 | WP_124065455 | DUF1496 domain-containing protein | - |
| J3S88_RS25000 (J3S88_24860) | 40208..40642 | + | 435 | Protein_45 | CPBP family intramembrane glutamate endopeptidase | - |
| J3S88_RS25005 (J3S88_24865) | 40657..41862 | - | 1206 | WP_025987686 | IS4-like element IS10A family transposase | - |
| J3S88_RS25015 (J3S88_24875) | 42775..43572 | + | 798 | WP_015059991 | OXA-48 family carbapenem-hydrolyzing class D beta-lactamase OXA-48 | - |