T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 34865..62207
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| U0540_RS28490 (U0540_28490) | 29949..30260 | + | 312 | WP_004187333 | hypothetical protein | - |
| U0540_RS28495 (U0540_28495) | 30393..30929 | + | 537 | WP_004187332 | hypothetical protein | - |
| U0540_RS28500 (U0540_28500) | 31431..31826 | - | 396 | WP_019725163 | hypothetical protein | - |
| U0540_RS28505 (U0540_28505) | 31861..32388 | + | 528 | WP_172740549 | plasmid mobilization protein MobA | - |
| U0540_RS28510 (U0540_28510) | 32375..34354 | + | 1980 | WP_004187323 | TraI/MobA(P) family conjugative relaxase | - |
| U0540_RS28515 (U0540_28515) | 34368..34868 | + | 501 | WP_004187320 | DotD/TraH family lipoprotein | - |
| U0540_RS28520 (U0540_28520) | 34865..35644 | + | 780 | WP_004187315 | type IV secretory system conjugative DNA transfer family protein | traI |
| U0540_RS28525 (U0540_28525) | 35655..36818 | + | 1164 | WP_004187313 | plasmid transfer ATPase TraJ | virB11 |
| U0540_RS28530 (U0540_28530) | 36808..37068 | + | 261 | WP_004187310 | IcmT/TraK family protein | traK |
| U0540_RS28535 (U0540_28535) | 37093..40530 | + | 3438 | WP_015586048 | LPD7 domain-containing protein | - |
| U0540_RS28540 (U0540_28540) | 40496..41008 | + | 513 | WP_011091071 | hypothetical protein | traL |
| U0540_RS28545 (U0540_28545) | 41009..41221 | - | 213 | WP_305953721 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| U0540_RS28550 (U0540_28550) | 41193..41603 | - | 411 | WP_004187465 | H-NS family nucleoid-associated regulatory protein | - |
| U0540_RS28555 (U0540_28555) | 41671..42384 | + | 714 | WP_004187467 | DotI/IcmL family type IV secretion protein | traM |
| U0540_RS28560 (U0540_28560) | 42393..43340 | + | 948 | WP_326972646 | DotH/IcmK family type IV secretion protein | traN |
| U0540_RS28565 (U0540_28565) | 43301..43543 | + | 243 | WP_158513517 | DotH/IcmK family type IV secretion protein | traN |
| U0540_RS28570 (U0540_28570) | 43555..44904 | + | 1350 | WP_004187474 | conjugal transfer protein TraO | traO |
| U0540_RS28575 (U0540_28575) | 44916..45620 | + | 705 | WP_015060002 | conjugal transfer protein TraP | traP |
| U0540_RS28580 (U0540_28580) | 45644..46174 | + | 531 | WP_004187478 | conjugal transfer protein TraQ | traQ |
| U0540_RS28585 (U0540_28585) | 46191..46580 | + | 390 | WP_004187479 | DUF6750 family protein | traR |
| U0540_RS28590 (U0540_28590) | 46626..47120 | + | 495 | WP_004187480 | hypothetical protein | - |
| U0540_RS28595 (U0540_28595) | 47594..50167 | + | 2574 | WP_227640156 | conjugal transfer protein | traU |
| U0540_RS28600 (U0540_28600) | 50164..51372 | + | 1209 | WP_011091082 | conjugal transfer protein TraW | traW |
| U0540_RS28605 (U0540_28605) | 51369..51965 | + | 597 | WP_015060003 | hypothetical protein | - |
| U0540_RS28610 (U0540_28610) | 51958..54153 | + | 2196 | WP_015062834 | DotA/TraY family protein | traY |
| U0540_RS28615 (U0540_28615) | 54155..54808 | + | 654 | WP_015060005 | hypothetical protein | - |
| U0540_RS28620 (U0540_28620) | 54889..55119 | + | 231 | WP_011091085 | IncL/M type plasmid replication protein RepC | - |
| U0540_RS28625 (U0540_28625) | 55415..56470 | + | 1056 | WP_015060006 | plasmid replication initiator RepA | - |
| U0540_RS28630 (U0540_28630) | 57693..57788 | + | 96 | WP_004206884 | DinQ-like type I toxin DqlB | - |
| U0540_RS28635 (U0540_28635) | 57839..59926 | - | 2088 | WP_004206885 | conjugal transfer protein TrbC | - |
| U0540_RS28640 (U0540_28640) | 59939..60889 | - | 951 | WP_004206886 | DsbC family protein | trbB |
| U0540_RS28645 (U0540_28645) | 60900..62207 | - | 1308 | WP_015059988 | hypothetical protein | trbA |
| U0540_RS28650 (U0540_28650) | 62215..62601 | - | 387 | WP_228146396 | lytic transglycosylase domain-containing protein | - |
| U0540_RS28655 (U0540_28655) | 62706..63056 | - | 351 | WP_124065455 | DUF1496 domain-containing protein | - |