T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 28030..55373
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RHA96_RS01960 (RHA96_01960) | 23115..23426 | + | 312 | WP_004187333 | hypothetical protein | - |
| RHA96_RS01965 (RHA96_01965) | 23559..24095 | + | 537 | WP_004187332 | hypothetical protein | - |
| RHA96_RS01970 (RHA96_01970) | 24597..24992 | - | 396 | WP_019725163 | hypothetical protein | - |
| RHA96_RS01975 (RHA96_01975) | 25027..25554 | + | 528 | WP_172740549 | plasmid mobilization protein MobA | - |
| RHA96_RS01980 (RHA96_01980) | 25541..26512 | + | 972 | WP_326971574 | relaxase/mobilization nuclease domain-containing protein | - |
| RHA96_RS01985 (RHA96_01985) | 26518..27519 | + | 1002 | WP_326971575 | hypothetical protein | - |
| RHA96_RS01990 (RHA96_01990) | 27533..28033 | + | 501 | WP_004187320 | DotD/TraH family lipoprotein | - |
| RHA96_RS01995 (RHA96_01995) | 28030..28809 | + | 780 | WP_004187315 | type IV secretory system conjugative DNA transfer family protein | traI |
| RHA96_RS02000 (RHA96_02000) | 28820..29983 | + | 1164 | WP_004187313 | plasmid transfer ATPase TraJ | virB11 |
| RHA96_RS02005 (RHA96_02005) | 29973..30233 | + | 261 | WP_004187310 | IcmT/TraK family protein | traK |
| RHA96_RS02010 (RHA96_02010) | 30258..33695 | + | 3438 | WP_015586048 | LPD7 domain-containing protein | - |
| RHA96_RS02015 (RHA96_02015) | 33661..34173 | + | 513 | WP_011091071 | hypothetical protein | traL |
| RHA96_RS02020 (RHA96_02020) | 34174..34386 | - | 213 | WP_305953721 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| RHA96_RS02025 (RHA96_02025) | 34358..34768 | - | 411 | WP_004187465 | H-NS family nucleoid-associated regulatory protein | - |
| RHA96_RS02030 (RHA96_02030) | 34836..35549 | + | 714 | WP_004187467 | DotI/IcmL family type IV secretion protein | traM |
| RHA96_RS02035 (RHA96_02035) | 35558..36709 | + | 1152 | WP_004187471 | DotH/IcmK family type IV secretion protein | traN |
| RHA96_RS02040 (RHA96_02040) | 36721..38070 | + | 1350 | WP_004187474 | conjugal transfer protein TraO | traO |
| RHA96_RS02045 (RHA96_02045) | 38082..38786 | + | 705 | WP_015060002 | conjugal transfer protein TraP | traP |
| RHA96_RS02050 (RHA96_02050) | 38810..39340 | + | 531 | WP_004187478 | conjugal transfer protein TraQ | traQ |
| RHA96_RS02055 (RHA96_02055) | 39357..39746 | + | 390 | WP_004187479 | DUF6750 family protein | traR |
| RHA96_RS02060 (RHA96_02060) | 39792..40286 | + | 495 | WP_004187480 | hypothetical protein | - |
| RHA96_RS02065 (RHA96_02065) | 40283..43333 | + | 3051 | WP_004187482 | hypothetical protein | traU |
| RHA96_RS02070 (RHA96_02070) | 43330..44538 | + | 1209 | WP_011091082 | conjugal transfer protein TraW | traW |
| RHA96_RS02075 (RHA96_02075) | 44535..45131 | + | 597 | WP_015060003 | hypothetical protein | - |
| RHA96_RS02080 (RHA96_02080) | 45124..47319 | + | 2196 | WP_015062834 | DotA/TraY family protein | traY |
| RHA96_RS02085 (RHA96_02085) | 47321..47974 | + | 654 | WP_015060005 | hypothetical protein | - |
| RHA96_RS02090 (RHA96_02090) | 48055..48285 | + | 231 | WP_011091085 | IncL/M type plasmid replication protein RepC | - |
| RHA96_RS02095 (RHA96_02095) | 48581..49636 | + | 1056 | WP_015060006 | plasmid replication initiator RepA | - |
| RHA96_RS02100 (RHA96_02100) | 50859..50954 | + | 96 | WP_004206884 | DinQ-like type I toxin DqlB | - |
| RHA96_RS02105 (RHA96_02105) | 51005..53092 | - | 2088 | WP_004206885 | conjugal transfer protein TrbC | - |
| RHA96_RS02110 (RHA96_02110) | 53105..54055 | - | 951 | WP_004206886 | DsbC family protein | trbB |
| RHA96_RS02115 (RHA96_02115) | 54066..55373 | - | 1308 | WP_015059988 | hypothetical protein | trbA |
| RHA96_RS02120 (RHA96_02120) | 55373..55768 | - | 396 | WP_004187436 | lytic transglycosylase domain-containing protein | - |
| RHA96_RS02125 (RHA96_02125) | 55873..56223 | - | 351 | WP_124065455 | DUF1496 domain-containing protein | - |
| RHA96_RS02130 (RHA96_02130) | 56336..56770 | + | 435 | Protein_76 | CPBP family intramembrane glutamate endopeptidase | - |
| RHA96_RS02135 (RHA96_02135) | 56785..57993 | - | 1209 | WP_001206290 | IS4-like element IS10A family transposase | - |
| RHA96_RS02140 (RHA96_02140) | 58296..59207 | + | 912 | WP_015586033 | LysR family transcriptional regulator | - |
| RHA96_RS02145 (RHA96_02145) | 59509..60306 | - | 798 | WP_015059991 | OXA-48 family carbapenem-hydrolyzing class D beta-lactamase OXA-48 | - |