T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 21042..46158
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CfB38_RS24995 (CfB38_5014) | 21042..23234 | - | 2193 | WP_065945170 | type IV conjugative transfer system coupling protein TraD | virb4 |
| CfB38_RS25000 (CfB38_5015) | 23368..24042 | - | 675 | WP_065945171 | tetratricopeptide repeat protein | - |
| CfB38_RS25005 (CfB38_5016) | 24117..24548 | - | 432 | WP_008324118 | entry exclusion protein | - |
| CfB38_RS25010 (CfB38_5017) | 24570..27392 | - | 2823 | WP_008324119 | conjugal transfer mating-pair stabilization protein TraG | traG |
| CfB38_RS25015 (CfB38_5018) | 27392..28762 | - | 1371 | WP_016247527 | conjugal transfer pilus assembly protein TraH | traH |
| CfB38_RS25020 (CfB38_5019) | 28749..29177 | - | 429 | WP_008324122 | hypothetical protein | - |
| CfB38_RS25025 (CfB38_5020) | 29170..29724 | - | 555 | WP_008324125 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| CfB38_RS25030 (CfB38_5021) | 29714..29962 | - | 249 | WP_065945172 | type-F conjugative transfer system pilin chaperone TraQ | - |
| CfB38_RS25035 (CfB38_5022) | 29979..30728 | - | 750 | WP_008324127 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| CfB38_RS25040 (CfB38_5023) | 30759..30947 | - | 189 | WP_008324128 | conjugal transfer protein TrbE | - |
| CfB38_RS25045 (CfB38_5024) | 30979..32832 | - | 1854 | WP_022652255 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| CfB38_RS25050 (CfB38_5025) | 32829..33458 | - | 630 | WP_008324130 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| CfB38_RS25055 (CfB38_5026) | 33475..34461 | - | 987 | WP_032160671 | conjugal transfer pilus assembly protein TraU | traU |
| CfB38_RS25060 (CfB38_5027) | 34464..35111 | - | 648 | WP_008324132 | type-F conjugative transfer system protein TraW | traW |
| CfB38_RS25065 (CfB38_5028) | 35111..35458 | - | 348 | WP_008324133 | type-F conjugative transfer system protein TrbI | - |
| CfB38_RS25070 (CfB38_5029) | 35455..38085 | - | 2631 | WP_008324134 | type IV secretion system protein TraC | virb4 |
| CfB38_RS25075 (CfB38_5030) | 38078..38644 | - | 567 | WP_008324135 | conjugal transfer pilus-stabilizing protein TraP | - |
| CfB38_RS25080 (CfB38_5031) | 38634..39035 | - | 402 | WP_008324137 | hypothetical protein | - |
| CfB38_RS25085 (CfB38_5032) | 39019..39204 | - | 186 | WP_008324139 | hypothetical protein | - |
| CfB38_RS25090 (CfB38_5033) | 39208..39432 | - | 225 | WP_008324141 | TraR/DksA C4-type zinc finger protein | - |
| CfB38_RS25095 (CfB38_5034) | 39552..40091 | - | 540 | WP_058659925 | type IV conjugative transfer system lipoprotein TraV | traV |
| CfB38_RS25100 (CfB38_5035) | 40113..41507 | - | 1395 | WP_008324156 | F-type conjugal transfer pilus assembly protein TraB | traB |
| CfB38_RS25105 (CfB38_5036) | 41494..42237 | - | 744 | WP_008324157 | type-F conjugative transfer system secretin TraK | traK |
| CfB38_RS25110 (CfB38_5037) | 42224..42790 | - | 567 | WP_008324158 | type IV conjugative transfer system protein TraE | traE |
| CfB38_RS25115 (CfB38_5038) | 42805..43110 | - | 306 | WP_008324160 | type IV conjugative transfer system protein TraL | traL |
| CfB38_RS25120 (CfB38_5039) | 43261..43611 | - | 351 | WP_016247536 | type IV conjugative transfer system pilin TraA | - |
| CfB38_RS25125 (CfB38_5040) | 43669..43893 | - | 225 | WP_008324165 | TraY domain-containing protein | - |
| CfB38_RS25130 (CfB38_5041) | 43980..44669 | - | 690 | WP_008324166 | hypothetical protein | - |
| CfB38_RS25135 (CfB38_5042) | 44858..45250 | - | 393 | WP_065945173 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| CfB38_RS25140 (CfB38_5043) | 45682..46158 | + | 477 | WP_008324168 | transglycosylase SLT domain-containing protein | virB1 |
| CfB38_RS25145 (CfB38_5044) | 46205..46735 | - | 531 | WP_008324170 | antirestriction protein | - |
| CfB38_RS25150 (CfB38_5045) | 47362..48192 | - | 831 | WP_065945174 | N-6 DNA methylase | - |
| CfB38_RS25155 (CfB38_5046) | 48235..48498 | - | 264 | WP_008324174 | hypothetical protein | - |
| CfB38_RS25160 (CfB38_5047) | 48584..48928 | - | 345 | WP_008324177 | hypothetical protein | - |
| CfB38_RS25165 (CfB38_5048) | 48975..49262 | - | 288 | WP_008324178 | hypothetical protein | - |
| CfB38_RS25170 (CfB38_5049) | 49316..49690 | - | 375 | WP_008324180 | hypothetical protein | - |
| CfB38_RS25175 (CfB38_5050) | 50317..50676 | - | 360 | WP_008324181 | hypothetical protein | - |
| CfB38_RS25180 (CfB38_5051) | 50738..51061 | - | 324 | WP_008324183 | hypothetical protein | - |