T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 62076..86027
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJU40_RS28625 (LJU40_28625) | 62076..64376 | - | 2301 | WP_064392534 | type IV conjugative transfer system coupling protein TraD | virb4 |
| LJU40_RS28630 (LJU40_28630) | 64614..65141 | - | 528 | WP_064392535 | hypothetical protein | - |
| LJU40_RS28635 (LJU40_28635) | 65147..67996 | - | 2850 | WP_064381395 | conjugal transfer mating-pair stabilization protein TraG | traG |
| LJU40_RS28640 (LJU40_28640) | 67996..69411 | - | 1416 | WP_177342648 | conjugal transfer pilus assembly protein TraH | traH |
| LJU40_RS28645 (LJU40_28645) | 69799..70329 | - | 531 | WP_077268548 | hypothetical protein | - |
| LJU40_RS28650 (LJU40_28650) | 70354..70908 | - | 555 | WP_064381391 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| LJU40_RS28655 (LJU40_28655) | 70880..71119 | - | 240 | WP_064381389 | type-F conjugative transfer system pilin chaperone TraQ | - |
| LJU40_RS28660 (LJU40_28660) | 71130..71882 | - | 753 | WP_064381388 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| LJU40_RS28665 (LJU40_28665) | 71901..72227 | - | 327 | WP_064381386 | hypothetical protein | - |
| LJU40_RS28670 (LJU40_28670) | 72238..72465 | - | 228 | WP_064392539 | conjugal transfer protein TrbE | - |
| LJU40_RS28675 (LJU40_28675) | 72455..72736 | - | 282 | WP_064392542 | hypothetical protein | - |
| LJU40_RS28680 (LJU40_28680) | 72773..74647 | - | 1875 | WP_064392546 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| LJU40_RS28685 (LJU40_28685) | 74644..75261 | - | 618 | WP_064392548 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| LJU40_RS28690 (LJU40_28690) | 75274..76257 | - | 984 | WP_177342650 | conjugal transfer pilus assembly protein TraU | traU |
| LJU40_RS28695 (LJU40_28695) | 76277..76903 | - | 627 | WP_064392552 | type-F conjugative transfer system protein TraW | traW |
| LJU40_RS28700 (LJU40_28700) | 76900..77301 | - | 402 | WP_227807615 | type-F conjugative transfer system protein TrbI | - |
| LJU40_RS28705 (LJU40_28705) | 77334..79973 | - | 2640 | WP_227807613 | type IV secretion system protein TraC | virb4 |
| LJU40_RS28710 (LJU40_28710) | 80104..80508 | - | 405 | WP_064174410 | hypothetical protein | - |
| LJU40_RS28715 (LJU40_28715) | 80505..80729 | - | 225 | WP_064381372 | hypothetical protein | - |
| LJU40_RS28720 (LJU40_28720) | 80753..81046 | - | 294 | WP_049071697 | hypothetical protein | - |
| LJU40_RS28725 (LJU40_28725) | 81075..81479 | - | 405 | WP_064381370 | hypothetical protein | - |
| LJU40_RS28730 (LJU40_28730) | 81596..82177 | - | 582 | WP_064381368 | type IV conjugative transfer system lipoprotein TraV | traV |
| LJU40_RS30925 | 82200..82337 | - | 138 | Protein_90 | conjugal transfer protein TraP | - |
| LJU40_RS28740 (LJU40_28740) | 82405..83001 | - | 597 | WP_136404571 | conjugal transfer protein TraP | - |
| LJU40_RS28745 (LJU40_28745) | 82994..84409 | - | 1416 | WP_064381364 | F-type conjugal transfer pilus assembly protein TraB | traB |
| LJU40_RS28750 (LJU40_28750) | 84409..85149 | - | 741 | WP_064381362 | type-F conjugative transfer system secretin TraK | traK |
| LJU40_RS28755 (LJU40_28755) | 85136..85702 | - | 567 | WP_020323527 | type IV conjugative transfer system protein TraE | traE |
| LJU40_RS28760 (LJU40_28760) | 85722..86027 | - | 306 | WP_020323523 | type IV conjugative transfer system protein TraL | traL |
| LJU40_RS28765 (LJU40_28765) | 86041..86406 | - | 366 | WP_064381359 | type IV conjugative transfer system pilin TraA | - |
| LJU40_RS28770 (LJU40_28770) | 86470..86634 | - | 165 | WP_032426810 | TraY domain-containing protein | - |
| LJU40_RS28775 (LJU40_28775) | 86810..87502 | - | 693 | WP_064381358 | hypothetical protein | - |
| LJU40_RS28780 (LJU40_28780) | 87740..88132 | - | 393 | WP_032426796 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LJU40_RS28785 (LJU40_28785) | 88639..89061 | + | 423 | WP_077268549 | transglycosylase SLT domain-containing protein | - |
| LJU40_RS28790 (LJU40_28790) | 89084..89626 | - | 543 | WP_064392555 | antirestriction protein | - |