T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 6364..34978
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CK495_RS28225 (CK495_28220) | 6364..8676 | - | 2313 | WP_095849274 | type IV conjugative transfer system coupling protein TraD | virb4 |
| CK495_RS31590 | 8803..9492 | - | 690 | WP_014343485 | hypothetical protein | - |
| CK495_RS28235 (CK495_28230) | 9685..10416 | - | 732 | WP_013214036 | conjugal transfer complement resistance protein TraT | - |
| CK495_RS28240 (CK495_28235) | 10667..11269 | - | 603 | WP_013214035 | conjugal transfer protein TraS | - |
| CK495_RS28245 (CK495_28240) | 11292..14114 | - | 2823 | WP_095849275 | conjugal transfer mating-pair stabilization protein TraG | traG |
| CK495_RS28250 (CK495_28245) | 14114..15493 | - | 1380 | WP_074160414 | conjugal transfer pilus assembly protein TraH | traH |
| CK495_RS28255 (CK495_28250) | 15471..15914 | - | 444 | WP_013214032 | F-type conjugal transfer protein TrbF | - |
| CK495_RS28260 (CK495_28255) | 15960..16517 | - | 558 | WP_013214031 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| CK495_RS28265 (CK495_28260) | 16489..16728 | - | 240 | WP_004144400 | type-F conjugative transfer system pilin chaperone TraQ | - |
| CK495_RS28270 (CK495_28265) | 16739..17491 | - | 753 | WP_004152677 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| CK495_RS28275 (CK495_28270) | 17512..17838 | - | 327 | WP_004144402 | hypothetical protein | - |
| CK495_RS28280 (CK495_28275) | 17851..18099 | - | 249 | WP_004152675 | hypothetical protein | - |
| CK495_RS28285 (CK495_28280) | 18077..18331 | - | 255 | WP_004152674 | conjugal transfer protein TrbE | - |
| CK495_RS28290 (CK495_28285) | 18363..20318 | - | 1956 | WP_095849276 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| CK495_RS28295 (CK495_28290) | 20377..21015 | - | 639 | WP_004193871 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| CK495_RS28300 (CK495_28295) | 21028..22017 | - | 990 | WP_013214027 | conjugal transfer pilus assembly protein TraU | traU |
| CK495_RS28305 (CK495_28300) | 22014..22415 | - | 402 | WP_004194979 | hypothetical protein | - |
| CK495_RS28310 (CK495_28305) | 22450..23085 | - | 636 | WP_013214026 | type-F conjugative transfer system protein TraW | traW |
| CK495_RS28315 (CK495_28310) | 23085..23474 | - | 390 | WP_013214025 | type-F conjugative transfer system protein TrbI | - |
| CK495_RS28320 (CK495_28315) | 23474..26113 | - | 2640 | WP_013214024 | type IV secretion system protein TraC | virb4 |
| CK495_RS28325 (CK495_28320) | 26185..26583 | - | 399 | WP_014343490 | hypothetical protein | - |
| CK495_RS28335 (CK495_28330) | 26961..27365 | - | 405 | WP_004197817 | hypothetical protein | - |
| CK495_RS28340 (CK495_28335) | 27432..27743 | - | 312 | WP_013214022 | hypothetical protein | - |
| CK495_RS28345 (CK495_28340) | 27744..27962 | - | 219 | WP_004195468 | hypothetical protein | - |
| CK495_RS28350 (CK495_28345) | 28285..28869 | - | 585 | WP_023287136 | type IV conjugative transfer system lipoprotein TraV | traV |
| CK495_RS28355 (CK495_28350) | 28942..30366 | - | 1425 | WP_013214020 | F-type conjugal transfer pilus assembly protein TraB | traB |
| CK495_RS28360 (CK495_28355) | 30366..31106 | - | 741 | WP_013214019 | type-F conjugative transfer system secretin TraK | traK |
| CK495_RS28365 (CK495_28360) | 31093..31659 | - | 567 | WP_004144423 | type IV conjugative transfer system protein TraE | traE |
| CK495_RS28370 (CK495_28365) | 31679..31984 | - | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| CK495_RS28375 (CK495_28370) | 31998..32366 | - | 369 | WP_004194426 | type IV conjugative transfer system pilin TraA | - |
| CK495_RS28380 (CK495_28375) | 32428..32634 | - | 207 | WP_171773970 | TraY domain-containing protein | - |
| CK495_RS28385 (CK495_28380) | 32749..33486 | - | 738 | WP_013214018 | conjugal transfer protein TrbJ | - |
| CK495_RS28390 (CK495_28385) | 33686..34102 | - | 417 | WP_014343494 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| CK495_RS28395 (CK495_28390) | 34493..34978 | + | 486 | WP_001568108 | transglycosylase SLT domain-containing protein | virB1 |
| CK495_RS28400 (CK495_28395) | 35011..35340 | - | 330 | WP_053390269 | DUF5983 family protein | - |
| CK495_RS28405 (CK495_28400) | 35373..36194 | - | 822 | WP_023316395 | DUF932 domain-containing protein | - |