T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 11837..22162
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SLH58_RS00040 (NILFGBLM_00007) | 7019..9916 | + | 2898 | WP_001553819 | Tn3-like element Tn5403 family transposase | - |
| SLH58_RS00045 (NILFGBLM_00008) | 9949..10332 | - | 384 | Protein_8 | IS6-like element IS26 family transposase | - |
| SLH58_RS00050 (NILFGBLM_00009) | 10397..10576 | - | 180 | Protein_9 | helix-turn-helix domain-containing protein | - |
| SLH58_RS00055 | 10843..11130 | + | 288 | Protein_10 | DUF6710 family protein | - |
| SLH58_RS00060 (NILFGBLM_00010) | 11304..11837 | - | 534 | WP_000792636 | phospholipase D family protein | - |
| SLH58_RS00065 (NILFGBLM_00011) | 11837..12832 | - | 996 | WP_000128596 | ATPase, T2SS/T4P/T4SS family | virB11 |
| SLH58_RS00070 (NILFGBLM_00012) | 12874..14034 | - | 1161 | WP_000101710 | type IV secretion system protein VirB10 | virB10 |
| SLH58_RS00075 (NILFGBLM_00013) | 14034..14918 | - | 885 | WP_000735066 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| SLH58_RS00080 (NILFGBLM_00014) | 14929..15627 | - | 699 | WP_000646594 | virB8 family protein | virB8 |
| SLH58_RS00085 | 15617..15775 | - | 159 | WP_012561180 | hypothetical protein | - |
| SLH58_RS00090 (NILFGBLM_00015) | 15846..16886 | - | 1041 | WP_001749958 | type IV secretion system protein | virB6 |
| SLH58_RS00095 (NILFGBLM_00016) | 16902..17129 | - | 228 | WP_001749959 | IncN-type entry exclusion lipoprotein EexN | - |
| SLH58_RS00100 (NILFGBLM_00017) | 17137..17901 | - | 765 | WP_013149461 | type IV secretion system protein | virB5 |
| SLH58_RS00105 (NILFGBLM_00018) | 17868..20468 | - | 2601 | WP_001749961 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| SLH58_RS00110 (NILFGBLM_00019) | 20468..20785 | - | 318 | WP_000496058 | VirB3 family type IV secretion system protein | virB3 |
| SLH58_RS00115 (NILFGBLM_00020) | 20835..21128 | - | 294 | WP_001749962 | hypothetical protein | virB2 |
| SLH58_RS00120 (NILFGBLM_00021) | 21138..21419 | - | 282 | WP_000440698 | transcriptional repressor KorA | - |
| SLH58_RS00125 (NILFGBLM_00022) | 21428..22162 | - | 735 | WP_001749963 | lytic transglycosylase domain-containing protein | virB1 |
| SLH58_RS00130 (NILFGBLM_00023) | 22205..22576 | + | 372 | WP_011867773 | H-NS family nucleoid-associated regulatory protein | - |
| SLH58_RS00135 (NILFGBLM_00024) | 22592..22936 | + | 345 | WP_001749964 | hypothetical protein | - |
| SLH58_RS00140 (NILFGBLM_00025) | 22933..23247 | + | 315 | WP_001749965 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| SLH58_RS00145 (NILFGBLM_00026) | 23414..26422 | - | 3009 | WP_001556712 | Tn3 family transposase | - |
| SLH58_RS00150 (NILFGBLM_00027) | 26586..27158 | + | 573 | WP_001556711 | recombinase family protein | - |