T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 3596..29926
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C4623_RS25095 (C4623_23505) | 144..317 | - | 174 | Protein_0 | hypothetical protein | - |
| C4623_RS25100 | 387..593 | + | 207 | WP_000547968 | hypothetical protein | - |
| C4623_RS23555 (C4623_23515) | 618..905 | + | 288 | WP_000107535 | hypothetical protein | - |
| C4623_RS23560 (C4623_23520) | 989..2185 | - | 1197 | WP_001358663 | IS110-like element ISEc20 family transposase | - |
| C4623_RS23565 (C4623_23525) | 2478..3299 | + | 822 | WP_143189711 | DUF932 domain-containing protein | - |
| C4623_RS23570 (C4623_23530) | 3596..4198 | - | 603 | WP_000243703 | transglycosylase SLT domain-containing protein | - |
| C4623_RS23575 (C4623_23535) | 4519..4902 | + | 384 | WP_001151524 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| C4623_RS23580 (C4623_23540) | 5089..5778 | + | 690 | WP_000283384 | conjugal transfer transcriptional regulator TraJ | - |
| C4623_RS23585 (C4623_23545) | 5877..6272 | + | 396 | WP_001309237 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| C4623_RS23590 (C4623_23550) | 6305..6670 | + | 366 | WP_000994782 | type IV conjugative transfer system pilin TraA | - |
| C4623_RS23595 (C4623_23555) | 6685..6996 | + | 312 | WP_000012126 | type IV conjugative transfer system protein TraL | traL |
| C4623_RS23600 (C4623_23560) | 7018..7584 | + | 567 | WP_000399794 | type IV conjugative transfer system protein TraE | traE |
| C4623_RS23605 (C4623_23565) | 7571..8299 | + | 729 | WP_001230783 | type-F conjugative transfer system secretin TraK | traK |
| C4623_RS23610 (C4623_23570) | 8299..9726 | + | 1428 | WP_000146635 | F-type conjugal transfer pilus assembly protein TraB | traB |
| C4623_RS23615 (C4623_23575) | 9716..10303 | + | 588 | WP_000002771 | conjugal transfer pilus-stabilizing protein TraP | - |
| C4623_RS23620 (C4623_23580) | 10290..10610 | + | 321 | WP_001057280 | conjugal transfer protein TrbD | - |
| C4623_RS23625 (C4623_23585) | 10607..11122 | + | 516 | WP_000724020 | type IV conjugative transfer system lipoprotein TraV | traV |
| C4623_RS23630 (C4623_23590) | 11257..11478 | + | 222 | WP_001278689 | conjugal transfer protein TraR | - |
| C4623_RS23635 (C4623_23595) | 11638..14265 | + | 2628 | WP_001064260 | type IV secretion system protein TraC | virb4 |
| C4623_RS23640 (C4623_23600) | 14262..14648 | + | 387 | WP_000214096 | type-F conjugative transfer system protein TrbI | - |
| C4623_RS23645 (C4623_23605) | 14645..15277 | + | 633 | WP_001203720 | type-F conjugative transfer system protein TraW | traW |
| C4623_RS23650 (C4623_23610) | 15274..16266 | + | 993 | WP_000830839 | conjugal transfer pilus assembly protein TraU | traU |
| C4623_RS23655 (C4623_23615) | 16275..16913 | + | 639 | WP_024233422 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| C4623_RS23660 (C4623_23620) | 16910..17290 | + | 381 | WP_000174466 | hypothetical protein | - |
| C4623_RS23665 (C4623_23625) | 17526..19388 | + | 1863 | WP_237710346 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| C4623_RS23670 (C4623_23630) | 19415..19672 | + | 258 | WP_000864330 | conjugal transfer protein TrbE | - |
| C4623_RS23675 (C4623_23635) | 19665..20408 | + | 744 | WP_001030376 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| C4623_RS23680 (C4623_23640) | 20424..20771 | + | 348 | WP_001287677 | conjugal transfer protein TrbA | - |
| C4623_RS23685 (C4623_23645) | 20890..21174 | + | 285 | WP_024127867 | type-F conjugative transfer system pilin chaperone TraQ | - |
| C4623_RS23690 (C4623_23650) | 21161..21706 | + | 546 | WP_000052618 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| C4623_RS23695 (C4623_23655) | 21636..21998 | + | 363 | WP_071608404 | P-type conjugative transfer protein TrbJ | - |
| C4623_RS23700 (C4623_23660) | 21998..23371 | + | 1374 | WP_172449589 | conjugal transfer pilus assembly protein TraH | traH |
| C4623_RS23705 (C4623_23665) | 23368..26190 | + | 2823 | WP_089615093 | conjugal transfer mating-pair stabilization protein TraG | traG |
| C4623_RS23710 (C4623_23670) | 26206..26703 | + | 498 | WP_000605867 | hypothetical protein | - |
| C4623_RS23715 (C4623_23675) | 26735..27466 | + | 732 | WP_024257478 | conjugal transfer complement resistance protein TraT | - |
| C4623_RS23720 (C4623_23680) | 27719..29926 | + | 2208 | WP_074467133 | type IV conjugative transfer system coupling protein TraD | virb4 |