T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 3310..22506
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSQ78_RS24295 (CSQ78_24065) | 998..2065 | - | 1068 | WP_060437507 | plasmid replication initiator RepA | - |
| CSQ78_RS24300 (CSQ78_24070) | 2350..2580 | - | 231 | WP_004187496 | IncL/M type plasmid replication protein RepC | - |
| CSQ78_RS24305 (CSQ78_24075) | 2654..3307 | - | 654 | WP_004206935 | hypothetical protein | - |
| CSQ78_RS24310 (CSQ78_24080) | 3310..5490 | - | 2181 | WP_004187492 | DotA/TraY family protein | traY |
| CSQ78_RS24315 (CSQ78_24085) | 5483..6133 | - | 651 | WP_004187488 | hypothetical protein | - |
| CSQ78_RS24320 (CSQ78_24090) | 6130..7338 | - | 1209 | WP_004187486 | conjugal transfer protein TraW | traW |
| CSQ78_RS24325 (CSQ78_24095) | 7335..10385 | - | 3051 | WP_011154474 | conjugative transfer protein | traU |
| CSQ78_RS24330 (CSQ78_24100) | 10382..10876 | - | 495 | WP_004187480 | hypothetical protein | - |
| CSQ78_RS24335 (CSQ78_24105) | 10922..11311 | - | 390 | WP_011154472 | DUF6750 family protein | traR |
| CSQ78_RS24340 (CSQ78_24110) | 11328..11858 | - | 531 | WP_004187478 | conjugal transfer protein TraQ | traQ |
| CSQ78_RS24345 (CSQ78_24115) | 11882..12586 | - | 705 | WP_099769957 | conjugal transfer protein TraP | traP |
| CSQ78_RS24350 (CSQ78_24120) | 12598..13947 | - | 1350 | WP_004206932 | conjugal transfer protein TraO | traO |
| CSQ78_RS24355 (CSQ78_24125) | 13959..15110 | - | 1152 | WP_015062843 | DotH/IcmK family type IV secretion protein | traN |
| CSQ78_RS24360 (CSQ78_24130) | 15119..15832 | - | 714 | WP_242444826 | DotI/IcmL family type IV secretion protein | traM |
| CSQ78_RS24365 (CSQ78_24135) | 15900..16310 | + | 411 | WP_004187465 | H-NS family nucleoid-associated regulatory protein | - |
| CSQ78_RS24370 (CSQ78_24140) | 16339..16494 | + | 156 | WP_172693602 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| CSQ78_RS24375 (CSQ78_24145) | 16495..17007 | - | 513 | WP_011091071 | hypothetical protein | traL |
| CSQ78_RS29715 | 16973..20278 | - | 3306 | WP_219818010 | LPD7 domain-containing protein | - |
| CSQ78_RS24385 (CSQ78_24155) | 20303..20563 | - | 261 | WP_004187310 | IcmT/TraK family protein | traK |
| CSQ78_RS24390 (CSQ78_24160) | 20553..21716 | - | 1164 | WP_004206926 | plasmid transfer ATPase TraJ | virB11 |
| CSQ78_RS24395 (CSQ78_24165) | 21727..22506 | - | 780 | WP_004187315 | type IV secretory system conjugative DNA transfer family protein | traI |
| CSQ78_RS24400 (CSQ78_24170) | 22503..23003 | - | 501 | WP_004206925 | DotD/TraH family lipoprotein | - |
| CSQ78_RS24405 (CSQ78_24175) | 23017..24996 | - | 1980 | WP_099769959 | TraI/MobA(P) family conjugative relaxase | - |
| CSQ78_RS24410 (CSQ78_24180) | 24983..25300 | - | 318 | WP_004206923 | plasmid mobilization protein MobA | - |
| CSQ78_RS24415 (CSQ78_24185) | 25576..25941 | + | 366 | WP_060437505 | hypothetical protein | - |
| CSQ78_RS29720 | 26442..26597 | - | 156 | WP_227520852 | hypothetical protein | - |
| CSQ78_RS29725 | 26637..26978 | - | 342 | WP_242444827 | hypothetical protein | - |
| CSQ78_RS24425 (CSQ78_24195) | 27111..27422 | - | 312 | WP_004187333 | hypothetical protein | - |