T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 22159..44000
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSQ78_RS22480 (CSQ78_22275) | 17219..17626 | + | 408 | WP_015632445 | transposase | - |
| CSQ78_RS22485 (CSQ78_22280) | 17623..17972 | + | 350 | Protein_28 | IS66 family insertion sequence element accessory protein TnpB | - |
| CSQ78_RS22490 (CSQ78_22285) | 18002..19591 | + | 1590 | WP_015632444 | IS66 family transposase | - |
| CSQ78_RS22495 (CSQ78_22290) | 19614..19919 | - | 306 | WP_015632443 | phospholipase D-like domain-containing protein | - |
| CSQ78_RS22500 (CSQ78_22295) | 19965..22157 | - | 2193 | WP_015632442 | F-type conjugative transfer protein TrbC | - |
| CSQ78_RS22505 (CSQ78_22300) | 22159..23286 | - | 1128 | WP_157787237 | thioredoxin fold domain-containing protein | trbB |
| CSQ78_RS22510 (CSQ78_22305) | 23261..24679 | - | 1419 | WP_015632440 | hypothetical protein | trbA |
| CSQ78_RS22515 (CSQ78_22310) | 24781..25404 | - | 624 | WP_015632439 | plasmid IncI1-type surface exclusion protein ExcA | - |
| CSQ78_RS22520 (CSQ78_22315) | 25470..27614 | - | 2145 | WP_015632438 | DotA/TraY family protein | traY |
| CSQ78_RS22525 (CSQ78_22320) | 27656..28237 | - | 582 | WP_015632437 | conjugal transfer protein TraX | - |
| CSQ78_RS22530 (CSQ78_22325) | 28234..29430 | - | 1197 | WP_015632436 | conjugal transfer protein TraW | traW |
| CSQ78_RS22535 (CSQ78_22330) | 29441..32488 | - | 3048 | WP_015632435 | conjugal transfer protein | traU |
| CSQ78_RS28780 | 32498..32812 | - | 315 | WP_123677146 | hypothetical protein | traT |
| CSQ78_RS22545 (CSQ78_22340) | 33105..33506 | - | 402 | WP_015632433 | DUF6750 family protein | traR |
| CSQ78_RS22550 (CSQ78_22345) | 33560..34093 | - | 534 | WP_015632432 | conjugal transfer protein TraQ | traQ |
| CSQ78_RS22555 (CSQ78_22350) | 34103..34822 | - | 720 | WP_015632431 | conjugal transfer protein TraP | traP |
| CSQ78_RS22560 (CSQ78_22355) | 34828..36168 | - | 1341 | WP_015632430 | conjugal transfer protein TraO | traO |
| CSQ78_RS22565 (CSQ78_22360) | 36172..37275 | - | 1104 | WP_015632429 | DotH/IcmK family type IV secretion protein | traN |
| CSQ78_RS22570 (CSQ78_22365) | 37286..37990 | - | 705 | WP_015632428 | DotI/IcmL/TraM family protein | traM |
| CSQ78_RS22575 (CSQ78_22370) | 38026..38379 | - | 354 | WP_015632427 | hypothetical protein | traL |
| CSQ78_RS29310 | 38413..41736 | - | 3324 | WP_032495745 | LPD7 domain-containing protein | - |
| CSQ78_RS22590 (CSQ78_22380) | 41754..42020 | - | 267 | WP_032441926 | IcmT/TraK family protein | traK |
| CSQ78_RS22595 (CSQ78_22385) | 42017..43204 | - | 1188 | WP_032495744 | plasmid transfer ATPase TraJ | virB11 |
| CSQ78_RS22600 (CSQ78_22390) | 43182..44000 | - | 819 | WP_015632425 | type IV secretory system conjugative DNA transfer family protein | traI |
| CSQ78_RS22605 (CSQ78_22395) | 43997..44464 | - | 468 | WP_015632424 | DotD/TraH family lipoprotein | - |
| CSQ78_RS22610 (CSQ78_22400) | 44487..44966 | - | 480 | WP_015632423 | lytic transglycosylase domain-containing protein | - |
| CSQ78_RS22615 (CSQ78_22405) | 45664..45975 | - | 312 | WP_015632421 | hypothetical protein | - |
| CSQ78_RS28790 | 46009..46212 | - | 204 | WP_032495743 | hypothetical protein | - |
| CSQ78_RS22620 (CSQ78_22410) | 46230..46763 | - | 534 | WP_015632420 | transcription termination/antitermination NusG family protein | - |
| CSQ78_RS22625 (CSQ78_22415) | 47031..47609 | + | 579 | WP_015632419 | hypothetical protein | - |
| CSQ78_RS22630 (CSQ78_22420) | 47591..48061 | + | 471 | WP_032441927 | hypothetical protein | - |
| CSQ78_RS22635 (CSQ78_22425) | 48061..48447 | + | 387 | WP_015632417 | acyl-CoA thioesterase | - |