T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 24166..52775
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CWR42_RS13325 (CWR42_13335) | 24166..26478 | - | 2313 | WP_013214038 | type IV conjugative transfer system coupling protein TraD | virb4 |
| CWR42_RS28685 | 26605..27294 | - | 690 | WP_014343485 | hypothetical protein | - |
| CWR42_RS13335 (CWR42_13345) | 27487..28218 | - | 732 | WP_013214036 | conjugal transfer complement resistance protein TraT | - |
| CWR42_RS13340 (CWR42_13350) | 28469..29071 | - | 603 | WP_013214035 | conjugal transfer protein TraS | - |
| CWR42_RS13345 (CWR42_13355) | 29094..31916 | - | 2823 | WP_013214034 | conjugal transfer mating-pair stabilization protein TraG | traG |
| CWR42_RS13350 (CWR42_13360) | 31916..33295 | - | 1380 | WP_074160414 | conjugal transfer pilus assembly protein TraH | traH |
| CWR42_RS13355 (CWR42_13365) | 33273..33716 | - | 444 | WP_013214032 | F-type conjugal transfer protein TrbF | - |
| CWR42_RS13360 (CWR42_13370) | 33762..34319 | - | 558 | WP_013214031 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| CWR42_RS13365 (CWR42_13375) | 34291..34530 | - | 240 | WP_004144400 | type-F conjugative transfer system pilin chaperone TraQ | - |
| CWR42_RS13370 (CWR42_13380) | 34541..35293 | - | 753 | WP_004152677 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| CWR42_RS13375 (CWR42_13385) | 35314..35640 | - | 327 | WP_013214030 | hypothetical protein | - |
| CWR42_RS13380 (CWR42_13390) | 35653..35901 | - | 249 | WP_013214029 | hypothetical protein | - |
| CWR42_RS13385 (CWR42_13395) | 35879..36133 | - | 255 | WP_004152674 | conjugal transfer protein TrbE | - |
| CWR42_RS13390 (CWR42_13400) | 36165..38120 | - | 1956 | WP_014343489 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| CWR42_RS13395 (CWR42_13405) | 38179..38817 | - | 639 | WP_004193871 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| CWR42_RS13400 (CWR42_13410) | 38830..39819 | - | 990 | WP_013214027 | conjugal transfer pilus assembly protein TraU | traU |
| CWR42_RS13405 (CWR42_13415) | 39816..40217 | - | 402 | WP_004194979 | hypothetical protein | - |
| CWR42_RS13410 (CWR42_13420) | 40252..40887 | - | 636 | WP_013214026 | type-F conjugative transfer system protein TraW | traW |
| CWR42_RS13415 (CWR42_13425) | 40887..41276 | - | 390 | WP_013214025 | type-F conjugative transfer system protein TrbI | - |
| CWR42_RS13420 (CWR42_13430) | 41276..43915 | - | 2640 | WP_013214024 | type IV secretion system protein TraC | virb4 |
| CWR42_RS13425 (CWR42_13435) | 43987..44385 | - | 399 | WP_014343490 | hypothetical protein | - |
| CWR42_RS29140 | 44566..44718 | - | 153 | WP_227850486 | hypothetical protein | - |
| CWR42_RS13435 (CWR42_13445) | 44761..45165 | - | 405 | WP_004197817 | hypothetical protein | - |
| CWR42_RS13440 (CWR42_13450) | 45232..45543 | - | 312 | WP_013214022 | hypothetical protein | - |
| CWR42_RS13445 (CWR42_13455) | 45544..45762 | - | 219 | WP_004195468 | hypothetical protein | - |
| CWR42_RS13450 (CWR42_13460) | 46085..46669 | - | 585 | WP_014343493 | type IV conjugative transfer system lipoprotein TraV | traV |
| CWR42_RS13455 (CWR42_13465) | 46741..48164 | - | 1424 | Protein_42 | F-type conjugal transfer pilus assembly protein TraB | - |
| CWR42_RS13460 (CWR42_13470) | 48164..48904 | - | 741 | WP_013214019 | type-F conjugative transfer system secretin TraK | traK |
| CWR42_RS13465 (CWR42_13475) | 48891..49457 | - | 567 | WP_004144423 | type IV conjugative transfer system protein TraE | traE |
| CWR42_RS13470 (CWR42_13480) | 49477..49782 | - | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| CWR42_RS13475 (CWR42_13485) | 49796..50164 | - | 369 | WP_104011249 | type IV conjugative transfer system pilin TraA | - |
| CWR42_RS13480 (CWR42_13490) | 50226..50432 | - | 207 | WP_171773970 | TraY domain-containing protein | - |
| CWR42_RS13485 (CWR42_13495) | 50547..51283 | - | 737 | Protein_48 | conjugal transfer protein TrbJ | - |
| CWR42_RS13490 (CWR42_13500) | 51483..51899 | - | 417 | WP_014343494 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| CWR42_RS13495 (CWR42_13505) | 52290..52775 | + | 486 | WP_014343495 | transglycosylase SLT domain-containing protein | virB1 |
| CWR42_RS13500 (CWR42_13510) | 52808..53137 | - | 330 | WP_013214015 | DUF5983 family protein | - |
| CWR42_RS13505 (CWR42_13515) | 53170..53991 | - | 822 | WP_004152492 | DUF932 domain-containing protein | - |
| CWR42_RS29145 (CWR42_13535) | 54820..54924 | - | 105 | Protein_53 | transcriptional regulator | - |
| CWR42_RS13530 (CWR42_13540) | 54928..55206 | - | 279 | WP_004152721 | helix-turn-helix transcriptional regulator | - |
| CWR42_RS13535 (CWR42_13545) | 55196..55516 | - | 321 | WP_014343498 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CWR42_RS13540 (CWR42_13550) | 55597..55821 | - | 225 | WP_014343499 | hypothetical protein | - |
| CWR42_RS13545 (CWR42_13555) | 55832..56044 | - | 213 | WP_014343500 | hypothetical protein | - |
| CWR42_RS13550 (CWR42_13560) | 56105..56461 | - | 357 | WP_014343501 | hypothetical protein | - |
| CWR42_RS13560 (CWR42_13570) | 57302..57619 | - | 318 | WP_014343505 | hypothetical protein | - |