T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 47139..57464
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SLH58_RS00250 (CMEMAFDF_00051) | 42984..44417 | - | 1434 | WP_001288432 | DNA cytosine methyltransferase | - |
| SLH58_RS00255 (CMEMAFDF_00052) | 44516..44788 | + | 273 | Protein_50 | IS1 family transposase | - |
| SLH58_RS00260 (CMEMAFDF_00053) | 44799..45005 | - | 207 | WP_001749967 | hypothetical protein | - |
| SLH58_RS00265 (CMEMAFDF_00054) | 45010..45657 | - | 648 | WP_015344958 | restriction endonuclease | - |
| SLH58_RS00270 (CMEMAFDF_00055) | 45707..45940 | - | 234 | WP_001191790 | hypothetical protein | - |
| SLH58_RS00275 (CMEMAFDF_00056) | 46054..46368 | - | 315 | WP_001749965 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| SLH58_RS00280 (CMEMAFDF_00057) | 46365..46709 | - | 345 | WP_001749964 | hypothetical protein | - |
| SLH58_RS00285 (CMEMAFDF_00058) | 46725..47096 | - | 372 | WP_011867773 | H-NS family nucleoid-associated regulatory protein | - |
| SLH58_RS00290 (CMEMAFDF_00059) | 47139..47873 | + | 735 | WP_001749963 | lytic transglycosylase domain-containing protein | virB1 |
| SLH58_RS00295 (CMEMAFDF_00060) | 47882..48163 | + | 282 | WP_000440698 | transcriptional repressor KorA | - |
| SLH58_RS00300 (CMEMAFDF_00061) | 48173..48466 | + | 294 | WP_001749962 | hypothetical protein | virB2 |
| SLH58_RS00305 (CMEMAFDF_00062) | 48516..48833 | + | 318 | WP_000496058 | VirB3 family type IV secretion system protein | virB3 |
| SLH58_RS00310 (CMEMAFDF_00063) | 48833..51433 | + | 2601 | WP_001749961 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| SLH58_RS00315 (CMEMAFDF_00064) | 51451..52164 | + | 714 | WP_001749960 | type IV secretion system protein | virB5 |
| SLH58_RS00320 (CMEMAFDF_00065) | 52172..52399 | + | 228 | WP_001749959 | IncN-type entry exclusion lipoprotein EexN | - |
| SLH58_RS00325 (CMEMAFDF_00066) | 52415..53455 | + | 1041 | WP_001749958 | type IV secretion system protein | virB6 |
| SLH58_RS00330 | 53526..53684 | + | 159 | WP_012561180 | hypothetical protein | - |
| SLH58_RS00335 (CMEMAFDF_00067) | 53674..54372 | + | 699 | WP_000646594 | virB8 family protein | virB8 |
| SLH58_RS00340 (CMEMAFDF_00068) | 54383..55267 | + | 885 | WP_000735066 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| SLH58_RS00345 (CMEMAFDF_00069) | 55267..56427 | + | 1161 | WP_000101710 | type IV secretion system protein VirB10 | virB10 |
| SLH58_RS00350 (CMEMAFDF_00070) | 56469..57464 | + | 996 | WP_000128596 | ATPase, T2SS/T4P/T4SS family | virB11 |
| SLH58_RS00355 (CMEMAFDF_00071) | 57464..57997 | + | 534 | WP_000792636 | phospholipase D family protein | - |
| SLH58_RS00360 | 58171..58299 | - | 129 | WP_002210551 | DUF6710 family protein | - |
| SLH58_RS00365 (CMEMAFDF_00072) | 58394..61222 | - | 2829 | Protein_72 | Tn3 family transposase | - |