T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 8347..19024
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SLH58_RS00025 (DGOINOJM_00004) | 3971..4204 | - | 234 | WP_319382216 | hypothetical protein | - |
| SLH58_RS00030 (DGOINOJM_00005) | 4337..5269 | + | 933 | WP_319382214 | LysR family transcriptional regulator | - |
| SLH58_RS00035 (DGOINOJM_00006) | 5953..7173 | - | 1221 | WP_011114072 | plasmid replication initiator TrfA | - |
| SLH58_RS00040 (DGOINOJM_00007) | 7220..7561 | - | 342 | WP_000019167 | single-stranded DNA-binding protein | - |
| SLH58_RS00045 (DGOINOJM_00008) | 7675..8037 | + | 363 | WP_010890126 | transcriptional regulator | - |
| SLH58_RS00050 (DGOINOJM_00009) | 8347..9309 | + | 963 | WP_000132020 | P-type conjugative transfer ATPase TrbB | virB11 |
| SLH58_RS00055 (DGOINOJM_00010) | 9326..9790 | + | 465 | WP_011114046 | conjugal transfer system pilin TrbC | virB2 |
| SLH58_RS00060 (DGOINOJM_00011) | 9794..10105 | + | 312 | WP_001207961 | conjugal transfer protein TrbD | virB3 |
| SLH58_RS00065 (DGOINOJM_00012) | 10102..12660 | + | 2559 | WP_011342945 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| SLH58_RS00070 (DGOINOJM_00013) | 12657..13439 | + | 783 | WP_006122481 | conjugal transfer protein TrbF | virB8 |
| SLH58_RS00075 (DGOINOJM_00014) | 13457..14356 | + | 900 | WP_006122480 | P-type conjugative transfer protein TrbG | virB9 |
| SLH58_RS00080 (DGOINOJM_00015) | 14359..14847 | + | 489 | WP_006122479 | conjugal transfer protein TrbH | - |
| SLH58_RS00085 (DGOINOJM_00016) | 14852..16273 | + | 1422 | WP_011114050 | TrbI/VirB10 family protein | virB10 |
| SLH58_RS00090 (DGOINOJM_00017) | 16294..17058 | + | 765 | WP_010890135 | P-type conjugative transfer protein TrbJ | virB5 |
| SLH58_RS00095 (DGOINOJM_00018) | 17068..17295 | + | 228 | WP_000644148 | entry exclusion lipoprotein TrbK | - |
| SLH58_RS00100 (DGOINOJM_00019) | 17306..19024 | + | 1719 | WP_011114051 | P-type conjugative transfer protein TrbL | virB6 |
| SLH58_RS00105 (DGOINOJM_00020) | 19042..19629 | + | 588 | WP_010890138 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| SLH58_RS00110 (DGOINOJM_00021) | 19643..20278 | + | 636 | WP_011114052 | transglycosylase SLT domain-containing protein | - |
| SLH58_RS00115 (DGOINOJM_00022) | 20307..20573 | + | 267 | WP_010890140 | hypothetical protein | - |
| SLH58_RS00120 (DGOINOJM_00023) | 20573..21271 | + | 699 | WP_011114053 | TraX family protein | - |
| SLH58_RS00125 (DGOINOJM_00024) | 21287..21718 | + | 432 | WP_319382215 | OmpA family protein | - |
| SLH58_RS00130 (DGOINOJM_00025) | 21873..22547 | + | 675 | WP_011178411 | DNA methylase | - |
| SLH58_RS00135 (DGOINOJM_00026) | 22794..23807 | - | 1014 | WP_000845048 | class 1 integron integrase IntI1 | - |