T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 9674..20351
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SLH58_RS00035 (ILEDJCEM_00006) | 5519..6523 | + | 1005 | WP_022542389 | IS110-like element IS4321 family transposase | - |
| SLH58_RS00040 (ILEDJCEM_00007) | 7280..8500 | - | 1221 | WP_011114072 | plasmid replication initiator TrfA | - |
| SLH58_RS00045 (ILEDJCEM_00008) | 8547..8888 | - | 342 | WP_000019167 | single-stranded DNA-binding protein | - |
| SLH58_RS00050 (ILEDJCEM_00009) | 9002..9364 | + | 363 | WP_010890126 | transcriptional regulator | - |
| SLH58_RS00055 (ILEDJCEM_00010) | 9674..10636 | + | 963 | WP_000132020 | P-type conjugative transfer ATPase TrbB | virB11 |
| SLH58_RS00060 (ILEDJCEM_00011) | 10653..11117 | + | 465 | WP_011114046 | conjugal transfer system pilin TrbC | virB2 |
| SLH58_RS00065 (ILEDJCEM_00012) | 11121..11432 | + | 312 | WP_001207961 | conjugal transfer protein TrbD | virB3 |
| SLH58_RS00070 (ILEDJCEM_00013) | 11429..13987 | + | 2559 | WP_011342945 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| SLH58_RS00075 (ILEDJCEM_00014) | 13984..14766 | + | 783 | WP_006122481 | conjugal transfer protein TrbF | virB8 |
| SLH58_RS00080 (ILEDJCEM_00015) | 14784..15683 | + | 900 | WP_006122480 | P-type conjugative transfer protein TrbG | virB9 |
| SLH58_RS00085 (ILEDJCEM_00016) | 15686..16174 | + | 489 | WP_006122479 | conjugal transfer protein TrbH | - |
| SLH58_RS00090 (ILEDJCEM_00017) | 16179..17600 | + | 1422 | WP_011114050 | TrbI/VirB10 family protein | virB10 |
| SLH58_RS00095 (ILEDJCEM_00018) | 17621..18385 | + | 765 | WP_010890135 | P-type conjugative transfer protein TrbJ | virB5 |
| SLH58_RS00100 (ILEDJCEM_00019) | 18395..18622 | + | 228 | WP_000644148 | entry exclusion lipoprotein TrbK | - |
| SLH58_RS00105 (ILEDJCEM_00020) | 18633..20351 | + | 1719 | WP_011114051 | P-type conjugative transfer protein TrbL | virB6 |
| SLH58_RS00110 (ILEDJCEM_00021) | 20369..20956 | + | 588 | WP_010890138 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| SLH58_RS00115 (ILEDJCEM_00022) | 20970..21605 | + | 636 | WP_011114052 | transglycosylase SLT domain-containing protein | - |
| SLH58_RS00120 (ILEDJCEM_00023) | 21634..21900 | + | 267 | WP_010890140 | hypothetical protein | - |
| SLH58_RS00125 (ILEDJCEM_00024) | 21900..22598 | + | 699 | WP_011114053 | TraX family protein | - |
| SLH58_RS00130 (ILEDJCEM_00025) | 22614..23045 | + | 432 | WP_319382215 | OmpA family protein | - |
| SLH58_RS00135 (ILEDJCEM_00026) | 23200..23874 | + | 675 | WP_011178411 | DNA methylase | - |
| SLH58_RS00140 (ILEDJCEM_00027) | 24121..25134 | - | 1014 | WP_000845048 | class 1 integron integrase IntI1 | - |