T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 61758..89026
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SLH58_RS00345 (CIODNGDB_00067) | 56844..57155 | + | 312 | WP_004187333 | hypothetical protein | - |
| SLH58_RS00350 (CIODNGDB_00068) | 57287..57823 | + | 537 | WP_011091066 | hypothetical protein | - |
| SLH58_RS00355 (CIODNGDB_00070) | 58324..58719 | - | 396 | WP_020805633 | hypothetical protein | - |
| SLH58_RS00360 | 58718..59281 | + | 564 | WP_319382137 | plasmid mobilization protein MobA | - |
| SLH58_RS00365 (CIODNGDB_00072) | 59268..61247 | + | 1980 | WP_004187323 | TraI/MobA(P) family conjugative relaxase | - |
| SLH58_RS00370 (CIODNGDB_00073) | 61261..61761 | + | 501 | WP_004187320 | DotD/TraH family lipoprotein | - |
| SLH58_RS00375 (CIODNGDB_00074) | 61758..62537 | + | 780 | WP_004187315 | type IV secretory system conjugative DNA transfer family protein | traI |
| SLH58_RS00380 (CIODNGDB_00075) | 62548..63711 | + | 1164 | WP_020805653 | plasmid transfer ATPase TraJ | virB11 |
| SLH58_RS00385 (CIODNGDB_00076) | 63701..63961 | + | 261 | WP_004187310 | IcmT/TraK family protein | traK |
| SLH58_RS00390 (CIODNGDB_00077) | 63986..67423 | + | 3438 | WP_319382138 | LPD7 domain-containing protein | - |
| SLH58_RS00395 (CIODNGDB_00078) | 67347..67901 | + | 555 | WP_011154467 | hypothetical protein | traL |
| SLH58_RS00400 (CIODNGDB_00079) | 67902..68099 | - | 198 | WP_004187464 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| SLH58_RS00405 (CIODNGDB_00080) | 68086..68496 | - | 411 | WP_004187465 | H-NS family nucleoid-associated regulatory protein | - |
| SLH58_RS00410 (CIODNGDB_00081) | 68495..69277 | + | 783 | WP_004206929 | DotI/IcmL family type IV secretion protein | traM |
| SLH58_RS00415 (CIODNGDB_00082) | 69313..70437 | + | 1125 | WP_319382139 | DotH/IcmK family type IV secretion protein | traN |
| SLH58_RS00420 (CIODNGDB_00083) | 70449..71012 | + | 564 | WP_319382181 | hypothetical protein | traO |
| SLH58_RS00425 (CIODNGDB_00084) | 71060..74140 | - | 3081 | WP_011787830 | Tn3 family transposase | - |
| SLH58_RS00430 (CIODNGDB_00085) | 74164..74475 | - | 312 | WP_011918375 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| SLH58_RS00435 (CIODNGDB_00086) | 74475..74735 | - | 261 | WP_011787805 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| SLH58_RS00440 (CIODNGDB_00087) | 74905..75525 | + | 621 | WP_011787804 | recombinase family protein | - |
| SLH58_RS00445 (CIODNGDB_00088) | 75643..75975 | - | 333 | WP_011787803 | TraR/DksA C4-type zinc finger protein | - |
| SLH58_RS00450 (CIODNGDB_00089) | 76066..76920 | - | 855 | WP_011787802 | universal stress protein | - |
| SLH58_RS00455 (CIODNGDB_00090) | 76955..78445 | - | 1491 | WP_011787801 | SulP family inorganic anion transporter | - |
| SLH58_RS00460 (CIODNGDB_00091) | 78926..79738 | + | 813 | WP_319382182 | conjugal transfer protein TraO | traO |
| SLH58_RS00465 (CIODNGDB_00092) | 79750..80454 | + | 705 | WP_020805696 | conjugal transfer protein TraP | traP |
| SLH58_RS00470 (CIODNGDB_00093) | 80478..81008 | + | 531 | WP_011091077 | conjugal transfer protein TraQ | traQ |
| SLH58_RS00475 (CIODNGDB_00094) | 81025..81414 | + | 390 | WP_020805690 | DUF6750 family protein | traR |
| SLH58_RS00480 (CIODNGDB_00095) | 81460..81954 | + | 495 | WP_223294957 | hypothetical protein | - |
| SLH58_RS00485 (CIODNGDB_00096) | 81951..85001 | + | 3051 | WP_020805687 | ATPase AAA | traU |
| SLH58_RS00490 (CIODNGDB_00097) | 85031..86206 | + | 1176 | WP_167577398 | conjugal transfer protein TraW | traW |
| SLH58_RS00495 (CIODNGDB_00098) | 86203..86853 | + | 651 | WP_032426814 | hypothetical protein | - |
| SLH58_RS00500 (CIODNGDB_00099) | 86846..89026 | + | 2181 | WP_032426815 | DotA/TraY family protein | traY |
| SLH58_RS00505 (CIODNGDB_00100) | 89029..89682 | + | 654 | WP_020805693 | hypothetical protein | - |
| SLH58_RS00510 (CIODNGDB_00101) | 89744..89986 | + | 243 | WP_023893611 | IncL/M type plasmid replication protein RepC | - |