T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 51747..77119
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SLH58_RS00315 (JBLGJADJ_00061) | 46833..47144 | + | 312 | WP_004187333 | hypothetical protein | - |
| SLH58_RS00320 (JBLGJADJ_00062) | 47276..47812 | + | 537 | WP_011091066 | hypothetical protein | - |
| SLH58_RS00325 (JBLGJADJ_00064) | 48313..48708 | - | 396 | WP_020805633 | hypothetical protein | - |
| SLH58_RS00330 | 48707..49270 | + | 564 | WP_319382137 | plasmid mobilization protein MobA | - |
| SLH58_RS00335 (JBLGJADJ_00066) | 49257..51236 | + | 1980 | WP_004187323 | TraI/MobA(P) family conjugative relaxase | - |
| SLH58_RS00340 (JBLGJADJ_00067) | 51250..51750 | + | 501 | WP_004187320 | DotD/TraH family lipoprotein | - |
| SLH58_RS00345 (JBLGJADJ_00068) | 51747..52526 | + | 780 | WP_004187315 | type IV secretory system conjugative DNA transfer family protein | traI |
| SLH58_RS00350 (JBLGJADJ_00069) | 52537..53700 | + | 1164 | WP_020805653 | plasmid transfer ATPase TraJ | virB11 |
| SLH58_RS00355 (JBLGJADJ_00070) | 53690..53950 | + | 261 | WP_004187310 | IcmT/TraK family protein | traK |
| SLH58_RS00360 (JBLGJADJ_00071) | 53975..57232 | + | 3258 | WP_319382209 | LPD7 domain-containing protein | - |
| SLH58_RS00365 (JBLGJADJ_00072) | 57156..57710 | + | 555 | WP_011154467 | hypothetical protein | traL |
| SLH58_RS00370 (JBLGJADJ_00073) | 57711..57908 | - | 198 | WP_004187464 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| SLH58_RS00375 (JBLGJADJ_00074) | 57895..58305 | - | 411 | WP_004187465 | H-NS family nucleoid-associated regulatory protein | - |
| SLH58_RS00380 (JBLGJADJ_00075) | 58304..59086 | + | 783 | WP_004206929 | DotI/IcmL family type IV secretion protein | traM |
| SLH58_RS00385 (JBLGJADJ_00076) | 59122..60246 | + | 1125 | WP_319382139 | DotH/IcmK family type IV secretion protein | traN |
| SLH58_RS00390 (JBLGJADJ_00077) | 60258..61607 | + | 1350 | WP_020805691 | conjugal transfer protein TraO | traO |
| SLH58_RS00395 (JBLGJADJ_00078) | 61619..62323 | + | 705 | WP_020805696 | conjugal transfer protein TraP | traP |
| SLH58_RS00400 (JBLGJADJ_00079) | 62347..62877 | + | 531 | WP_011091077 | conjugal transfer protein TraQ | traQ |
| SLH58_RS00405 (JBLGJADJ_00080) | 62894..63283 | + | 390 | WP_020805690 | DUF6750 family protein | traR |
| SLH58_RS00410 (JBLGJADJ_00081) | 63329..63823 | + | 495 | WP_223294957 | hypothetical protein | - |
| SLH58_RS00415 (JBLGJADJ_00082) | 63820..66870 | + | 3051 | WP_020805687 | ATPase AAA | traU |
| SLH58_RS00420 (JBLGJADJ_00083) | 66900..68075 | + | 1176 | WP_167577398 | conjugal transfer protein TraW | traW |
| SLH58_RS00425 (JBLGJADJ_00084) | 68072..68722 | + | 651 | WP_032426814 | hypothetical protein | - |
| SLH58_RS00430 (JBLGJADJ_00085) | 68806..71814 | - | 3009 | WP_047721822 | Tn3 family transposase | - |
| SLH58_RS00435 (JBLGJADJ_00086) | 71978..72544 | + | 567 | WP_004098835 | recombinase family protein | - |
| SLH58_RS00440 (JBLGJADJ_00087) | 72626..73279 | + | 654 | WP_205899663 | hypothetical protein | - |
| SLH58_RS00445 (JBLGJADJ_00088) | 73320..73934 | - | 615 | WP_032640595 | TIR domain-containing protein | - |
| SLH58_RS00450 (JBLGJADJ_00089) | 74103..74870 | + | 768 | WP_072060054 | DUF1883 domain-containing protein | - |
| SLH58_RS00455 (JBLGJADJ_00090) | 75005..77119 | + | 2115 | WP_319382210 | DotA/TraY family protein | traY |
| SLH58_RS00460 (JBLGJADJ_00091) | 77122..77775 | + | 654 | WP_020805693 | hypothetical protein | - |
| SLH58_RS00465 (JBLGJADJ_00092) | 77837..78079 | + | 243 | WP_023893611 | IncL/M type plasmid replication protein RepC | - |