T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 51747..77074
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SLH58_RS00315 (LFJGJFGH_00061) | 46833..47144 | + | 312 | WP_004187333 | hypothetical protein | - |
| SLH58_RS00320 (LFJGJFGH_00062) | 47276..47812 | + | 537 | WP_011091066 | hypothetical protein | - |
| SLH58_RS00325 (LFJGJFGH_00064) | 48313..48708 | - | 396 | WP_020805633 | hypothetical protein | - |
| SLH58_RS00330 | 48707..49270 | + | 564 | WP_319382137 | plasmid mobilization protein MobA | - |
| SLH58_RS00335 (LFJGJFGH_00066) | 49257..51236 | + | 1980 | WP_004187323 | TraI/MobA(P) family conjugative relaxase | - |
| SLH58_RS00340 (LFJGJFGH_00067) | 51250..51750 | + | 501 | WP_004187320 | DotD/TraH family lipoprotein | - |
| SLH58_RS00345 (LFJGJFGH_00068) | 51747..52526 | + | 780 | WP_004187315 | type IV secretory system conjugative DNA transfer family protein | traI |
| SLH58_RS00350 (LFJGJFGH_00069) | 52537..52800 | + | 264 | WP_319382185 | hypothetical protein | - |
| SLH58_RS00355 (LFJGJFGH_00070) | 52913..53680 | - | 768 | WP_072060054 | DUF1883 domain-containing protein | - |
| SLH58_RS00360 (LFJGJFGH_00071) | 53849..54463 | + | 615 | WP_032640595 | TIR domain-containing protein | - |
| SLH58_RS00365 (LFJGJFGH_00072) | 54504..55157 | - | 654 | WP_205899663 | hypothetical protein | - |
| SLH58_RS00370 (LFJGJFGH_00073) | 55239..55805 | - | 567 | WP_004098835 | recombinase family protein | - |
| SLH58_RS00375 (LFJGJFGH_00074) | 55969..58977 | + | 3009 | WP_047721822 | Tn3 family transposase | - |
| SLH58_RS00380 (LFJGJFGH_00075) | 58995..59924 | + | 930 | WP_319382186 | plasmid transfer ATPase TraJ | virB11 |
| SLH58_RS00385 (LFJGJFGH_00076) | 59914..60174 | + | 261 | WP_004187310 | IcmT/TraK family protein | traK |
| SLH58_RS00390 (LFJGJFGH_00077) | 60199..63411 | + | 3213 | WP_319382187 | LPD7 domain-containing protein | - |
| SLH58_RS00395 (LFJGJFGH_00078) | 63335..63889 | + | 555 | WP_011154467 | hypothetical protein | traL |
| SLH58_RS00400 (LFJGJFGH_00079) | 63890..64087 | - | 198 | WP_004187464 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| SLH58_RS00405 (LFJGJFGH_00080) | 64074..64484 | - | 411 | WP_004187465 | H-NS family nucleoid-associated regulatory protein | - |
| SLH58_RS00410 (LFJGJFGH_00081) | 64483..65265 | + | 783 | WP_004206929 | DotI/IcmL family type IV secretion protein | traM |
| SLH58_RS00415 (LFJGJFGH_00082) | 65301..66425 | + | 1125 | WP_319382139 | DotH/IcmK family type IV secretion protein | traN |
| SLH58_RS00420 (LFJGJFGH_00083) | 66437..67786 | + | 1350 | WP_020805691 | conjugal transfer protein TraO | traO |
| SLH58_RS00425 (LFJGJFGH_00084) | 67798..68502 | + | 705 | WP_020805696 | conjugal transfer protein TraP | traP |
| SLH58_RS00430 (LFJGJFGH_00085) | 68526..69056 | + | 531 | WP_011091077 | conjugal transfer protein TraQ | traQ |
| SLH58_RS00435 (LFJGJFGH_00086) | 69073..69462 | + | 390 | WP_020805690 | DUF6750 family protein | traR |
| SLH58_RS00440 (LFJGJFGH_00087) | 69508..70002 | + | 495 | WP_223294957 | hypothetical protein | - |
| SLH58_RS00445 (LFJGJFGH_00088) | 69999..73049 | + | 3051 | WP_020805687 | ATPase AAA | traU |
| SLH58_RS00450 (LFJGJFGH_00089) | 73079..74254 | + | 1176 | WP_167577398 | conjugal transfer protein TraW | traW |
| SLH58_RS00455 (LFJGJFGH_00090) | 74251..74901 | + | 651 | WP_032426814 | hypothetical protein | - |
| SLH58_RS00460 (LFJGJFGH_00091) | 74894..77074 | + | 2181 | WP_032426815 | DotA/TraY family protein | traY |
| SLH58_RS00465 (LFJGJFGH_00092) | 77077..77730 | + | 654 | WP_020805693 | hypothetical protein | - |
| SLH58_RS00470 (LFJGJFGH_00093) | 77792..78034 | + | 243 | WP_023893611 | IncL/M type plasmid replication protein RepC | - |