T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 36303..53799
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SLH58_RS00160 (CDMEECIE_00034) | 31700..32305 | + | 606 | WP_000509966 | recombinase family protein | - |
| SLH58_RS00165 (CDMEECIE_00035) | 32342..32767 | + | 426 | WP_048221173 | hypothetical protein | - |
| SLH58_RS00170 (CDMEECIE_00036) | 32949..33155 | + | 207 | WP_020323152 | DUF905 family protein | - |
| SLH58_RS00175 (CDMEECIE_00037) | 33229..33411 | + | 183 | WP_000170167 | hypothetical protein | - |
| SLH58_RS00180 (CDMEECIE_00038) | 33470..33841 | - | 372 | WP_227665545 | hypothetical protein | - |
| SLH58_RS00185 (CDMEECIE_00039) | 33884..34252 | - | 369 | WP_032416596 | plasmid stabilization protein StbC | - |
| SLH58_RS00190 (CDMEECIE_00040) | 34255..34971 | - | 717 | WP_020323147 | StbB family protein | - |
| SLH58_RS00195 (CDMEECIE_00041) | 34980..35411 | - | 432 | WP_020323173 | plasmid stabilization protein StbA | - |
| SLH58_RS00200 (CDMEECIE_00042) | 35827..36303 | + | 477 | WP_223226686 | traK protein | - |
| SLH58_RS00205 (CDMEECIE_00043) | 36303..37835 | + | 1533 | WP_020323171 | type IV secretion system DNA-binding domain-containing protein | virb4 |
| SLH58_RS00210 (CDMEECIE_00044) | 37840..41058 | + | 3219 | WP_020323154 | MobF family relaxase | - |
| SLH58_RS00215 (CDMEECIE_00045) | 41055..41720 | + | 666 | WP_020323157 | DUF6710 family protein | - |
| SLH58_RS00220 (CDMEECIE_00046) | 41713..42075 | + | 363 | WP_020323170 | hypothetical protein | - |
| SLH58_RS00225 (CDMEECIE_00047) | 42691..43002 | - | 312 | WP_032416518 | hypothetical protein | - |
| SLH58_RS00230 (CDMEECIE_00048) | 42999..43466 | - | 468 | WP_046092601 | phospholipase D family protein | - |
| SLH58_RS00235 (CDMEECIE_00049) | 43523..44524 | - | 1002 | WP_020323165 | ATPase, T2SS/T4P/T4SS family | virB11 |
| SLH58_RS00240 (CDMEECIE_00050) | 44575..45708 | - | 1134 | WP_020323153 | type IV secretion system protein VirB10 | virB10 |
| SLH58_RS00245 (CDMEECIE_00051) | 45708..46595 | - | 888 | WP_020323166 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| SLH58_RS00250 (CDMEECIE_00052) | 46606..47301 | - | 696 | WP_001208352 | type IV secretion system protein | virB8 |
| SLH58_RS00325 (CDMEECIE_00053) | 47312..47443 | - | 132 | WP_032493177 | hypothetical protein | - |
| SLH58_RS00255 (CDMEECIE_00054) | 47520..48557 | - | 1038 | WP_020323169 | type IV secretion system protein | virB6 |
| SLH58_RS00260 (CDMEECIE_00055) | 48574..48816 | - | 243 | WP_000858958 | EexN family lipoprotein | - |
| SLH58_RS00265 (CDMEECIE_00056) | 48826..49527 | - | 702 | WP_020323143 | type IV secretion system protein | virB5 |
| SLH58_RS00270 (CDMEECIE_00057) | 49543..52116 | - | 2574 | WP_020323176 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| SLH58_RS00275 (CDMEECIE_00058) | 52117..52434 | - | 318 | WP_000462629 | type IV secretion system protein VirB3 | virB3 |
| SLH58_RS00280 (CDMEECIE_00059) | 52474..52815 | - | 342 | WP_001121032 | TrbC/VirB2 family protein | virB2 |
| SLH58_RS00285 (CDMEECIE_00061) | 53017..53799 | - | 783 | WP_032416587 | lytic transglycosylase domain-containing protein | virB1 |
| SLH58_RS00290 (CDMEECIE_00062) | 53863..54216 | + | 354 | WP_223598071 | H-NS histone family protein | - |
| SLH58_RS00295 (CDMEECIE_00063) | 54220..54570 | + | 351 | WP_032416642 | hypothetical protein | - |
| SLH58_RS00300 (CDMEECIE_00064) | 54549..54905 | + | 357 | WP_227665546 | hypothetical protein | - |
| SLH58_RS00305 (CDMEECIE_00065) | 54909..55217 | + | 309 | WP_032416643 | hypothetical protein | - |
| SLH58_RS00310 (CDMEECIE_00066) | 55502..55687 | + | 186 | WP_006118530 | ribbon-helix-helix domain-containing protein | - |
| SLH58_RS00315 (CDMEECIE_00067) | 55684..56292 | - | 609 | WP_032449362 | recombinase family protein | - |
| SLH58_RS00320 (CDMEECIE_00068) | 56458..56790 | - | 333 | WP_020323168 | hypothetical protein | - |