T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 43530..61026
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SLH58_RS00215 (GFOBKLCA_00044) | 39200..39994 | + | 795 | WP_053075878 | DUF5417 domain-containing protein | - |
| SLH58_RS00220 (GFOBKLCA_00045) | 40176..40382 | + | 207 | WP_020323152 | DUF905 family protein | - |
| SLH58_RS00225 (GFOBKLCA_00046) | 40456..40638 | + | 183 | WP_000170167 | hypothetical protein | - |
| SLH58_RS00230 (GFOBKLCA_00047) | 40697..41068 | - | 372 | WP_227665545 | hypothetical protein | - |
| SLH58_RS00235 (GFOBKLCA_00048) | 41111..41479 | - | 369 | WP_032416596 | plasmid stabilization protein StbC | - |
| SLH58_RS00240 (GFOBKLCA_00049) | 41482..42198 | - | 717 | WP_020323147 | StbB family protein | - |
| SLH58_RS00245 (GFOBKLCA_00050) | 42207..42638 | - | 432 | WP_020323173 | plasmid stabilization protein StbA | - |
| SLH58_RS00250 (GFOBKLCA_00051) | 43054..43530 | + | 477 | WP_223226686 | traK protein | - |
| SLH58_RS00255 (GFOBKLCA_00052) | 43530..45062 | + | 1533 | WP_020323171 | type IV secretion system DNA-binding domain-containing protein | virb4 |
| SLH58_RS00260 (GFOBKLCA_00053) | 45067..48285 | + | 3219 | WP_020323154 | MobF family relaxase | - |
| SLH58_RS00265 (GFOBKLCA_00054) | 48282..48947 | + | 666 | WP_020323157 | DUF6710 family protein | - |
| SLH58_RS00270 (GFOBKLCA_00055) | 48940..49302 | + | 363 | WP_020323170 | hypothetical protein | - |
| SLH58_RS00275 (GFOBKLCA_00056) | 49918..50229 | - | 312 | WP_032416518 | hypothetical protein | - |
| SLH58_RS00280 (GFOBKLCA_00057) | 50226..50693 | - | 468 | WP_046092601 | phospholipase D family protein | - |
| SLH58_RS00285 (GFOBKLCA_00058) | 50750..51751 | - | 1002 | WP_020323165 | ATPase, T2SS/T4P/T4SS family | virB11 |
| SLH58_RS00290 (GFOBKLCA_00059) | 51802..52935 | - | 1134 | WP_020323153 | type IV secretion system protein VirB10 | virB10 |
| SLH58_RS00295 (GFOBKLCA_00060) | 52935..53822 | - | 888 | WP_020323166 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| SLH58_RS00300 (GFOBKLCA_00061) | 53833..54528 | - | 696 | WP_001208352 | type IV secretion system protein | virB8 |
| SLH58_RS00375 (GFOBKLCA_00062) | 54539..54670 | - | 132 | WP_032493177 | hypothetical protein | - |
| SLH58_RS00305 (GFOBKLCA_00063) | 54747..55784 | - | 1038 | WP_020323169 | type IV secretion system protein | virB6 |
| SLH58_RS00310 (GFOBKLCA_00064) | 55801..56043 | - | 243 | WP_000858958 | EexN family lipoprotein | - |
| SLH58_RS00315 (GFOBKLCA_00065) | 56053..56754 | - | 702 | WP_020323143 | type IV secretion system protein | virB5 |
| SLH58_RS00320 (GFOBKLCA_00066) | 56770..59343 | - | 2574 | WP_020323176 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| SLH58_RS00325 (GFOBKLCA_00067) | 59344..59661 | - | 318 | WP_000462629 | type IV secretion system protein VirB3 | virB3 |
| SLH58_RS00330 (GFOBKLCA_00068) | 59701..60042 | - | 342 | WP_001121032 | TrbC/VirB2 family protein | virB2 |
| SLH58_RS00335 (GFOBKLCA_00070) | 60244..61026 | - | 783 | WP_032416587 | lytic transglycosylase domain-containing protein | virB1 |
| SLH58_RS00340 (GFOBKLCA_00071) | 61090..61443 | + | 354 | WP_223598071 | H-NS histone family protein | - |
| SLH58_RS00345 (GFOBKLCA_00072) | 61447..61797 | + | 351 | WP_032416642 | hypothetical protein | - |
| SLH58_RS00350 (GFOBKLCA_00073) | 61776..62132 | + | 357 | WP_227665546 | hypothetical protein | - |
| SLH58_RS00355 (GFOBKLCA_00074) | 62136..62444 | + | 309 | WP_032416643 | hypothetical protein | - |
| SLH58_RS00360 (GFOBKLCA_00075) | 62729..62914 | + | 186 | WP_006118530 | ribbon-helix-helix domain-containing protein | - |
| SLH58_RS00365 (GFOBKLCA_00076) | 62911..63519 | - | 609 | WP_032449362 | recombinase family protein | - |
| SLH58_RS00370 (GFOBKLCA_00077) | 63685..64017 | - | 333 | WP_020323168 | hypothetical protein | - |