T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 47205..66533
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SLH58_RS00300 (MOCKNAFM_00058) | 42291..42602 | + | 312 | WP_004187333 | hypothetical protein | - |
| SLH58_RS00305 (MOCKNAFM_00059) | 42734..43270 | + | 537 | WP_011091066 | hypothetical protein | - |
| SLH58_RS00310 (MOCKNAFM_00061) | 43771..44166 | - | 396 | WP_020805633 | hypothetical protein | - |
| SLH58_RS00315 | 44165..44728 | + | 564 | WP_319382137 | plasmid mobilization protein MobA | - |
| SLH58_RS00320 (MOCKNAFM_00063) | 44715..46694 | + | 1980 | WP_004187323 | TraI/MobA(P) family conjugative relaxase | - |
| SLH58_RS00325 (MOCKNAFM_00064) | 46708..47208 | + | 501 | WP_004187320 | DotD/TraH family lipoprotein | - |
| SLH58_RS00330 (MOCKNAFM_00065) | 47205..47984 | + | 780 | WP_004187315 | type IV secretory system conjugative DNA transfer family protein | traI |
| SLH58_RS00335 (MOCKNAFM_00066) | 47995..49158 | + | 1164 | WP_020805653 | plasmid transfer ATPase TraJ | virB11 |
| SLH58_RS00340 (MOCKNAFM_00067) | 49148..49408 | + | 261 | WP_004187310 | IcmT/TraK family protein | traK |
| SLH58_RS00345 (MOCKNAFM_00068) | 49433..52870 | + | 3438 | WP_319382138 | LPD7 domain-containing protein | - |
| SLH58_RS00350 (MOCKNAFM_00069) | 52794..53348 | + | 555 | WP_011154467 | hypothetical protein | traL |
| SLH58_RS00355 (MOCKNAFM_00070) | 53349..53546 | - | 198 | WP_004187464 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| SLH58_RS00360 (MOCKNAFM_00071) | 53533..53943 | - | 411 | WP_004187465 | H-NS family nucleoid-associated regulatory protein | - |
| SLH58_RS00365 (MOCKNAFM_00072) | 53942..54724 | + | 783 | WP_004206929 | DotI/IcmL family type IV secretion protein | traM |
| SLH58_RS00370 (MOCKNAFM_00073) | 54760..55884 | + | 1125 | WP_319382139 | DotH/IcmK family type IV secretion protein | traN |
| SLH58_RS00375 (MOCKNAFM_00074) | 55896..57245 | + | 1350 | WP_020805691 | conjugal transfer protein TraO | traO |
| SLH58_RS00380 (MOCKNAFM_00075) | 57257..57961 | + | 705 | WP_020805696 | conjugal transfer protein TraP | traP |
| SLH58_RS00385 (MOCKNAFM_00076) | 57985..58515 | + | 531 | WP_011091077 | conjugal transfer protein TraQ | traQ |
| SLH58_RS00390 (MOCKNAFM_00077) | 58532..58921 | + | 390 | WP_020805690 | DUF6750 family protein | traR |
| SLH58_RS00395 (MOCKNAFM_00078) | 58967..59461 | + | 495 | WP_223294957 | hypothetical protein | - |
| SLH58_RS00400 (MOCKNAFM_00079) | 59458..62508 | + | 3051 | WP_020805687 | ATPase AAA | traU |
| SLH58_RS00405 (MOCKNAFM_00080) | 62538..63713 | + | 1176 | WP_167577398 | conjugal transfer protein TraW | traW |
| SLH58_RS00410 (MOCKNAFM_00081) | 63710..64360 | + | 651 | WP_032426814 | hypothetical protein | - |
| SLH58_RS00415 (MOCKNAFM_00082) | 64353..66533 | + | 2181 | WP_032426815 | DotA/TraY family protein | traY |
| SLH58_RS00420 (MOCKNAFM_00083) | 66536..67189 | + | 654 | WP_020805693 | hypothetical protein | - |
| SLH58_RS00425 (MOCKNAFM_00084) | 67251..67493 | + | 243 | WP_023893611 | IncL/M type plasmid replication protein RepC | - |