T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 12514..22839
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SLH58_RS00045 (GPIMDABO_00008) | 8706..9815 | + | 1110 | WP_000842134 | S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase | - |
| SLH58_RS00050 (GPIMDABO_00009) | 9837..10259 | + | 423 | Protein_9 | alpha/beta hydrolase-fold protein | - |
| SLH58_RS00055 (GPIMDABO_00010) | 10305..11009 | - | 705 | WP_001067855 | IS6-like element IS26 family transposase | - |
| SLH58_RS00060 (GPIMDABO_00011) | 11074..11253 | - | 180 | Protein_11 | helix-turn-helix domain-containing protein | - |
| SLH58_RS00065 | 11520..11807 | + | 288 | Protein_12 | DUF6710 family protein | - |
| SLH58_RS00070 (GPIMDABO_00012) | 11981..12514 | - | 534 | WP_000792636 | phospholipase D family protein | - |
| SLH58_RS00075 (GPIMDABO_00013) | 12514..13509 | - | 996 | WP_000128596 | ATPase, T2SS/T4P/T4SS family | virB11 |
| SLH58_RS00080 (GPIMDABO_00014) | 13551..14711 | - | 1161 | WP_000101710 | type IV secretion system protein VirB10 | virB10 |
| SLH58_RS00085 (GPIMDABO_00015) | 14711..15595 | - | 885 | WP_000735066 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| SLH58_RS00090 (GPIMDABO_00016) | 15606..16304 | - | 699 | WP_000646594 | virB8 family protein | virB8 |
| SLH58_RS00095 | 16294..16452 | - | 159 | WP_012561180 | hypothetical protein | - |
| SLH58_RS00100 (GPIMDABO_00017) | 16523..17563 | - | 1041 | WP_001749958 | type IV secretion system protein | virB6 |
| SLH58_RS00105 (GPIMDABO_00018) | 17579..17806 | - | 228 | WP_001749959 | IncN-type entry exclusion lipoprotein EexN | - |
| SLH58_RS00110 (GPIMDABO_00019) | 17814..18578 | - | 765 | WP_013149461 | type IV secretion system protein | virB5 |
| SLH58_RS00115 (GPIMDABO_00020) | 18545..21145 | - | 2601 | WP_001749961 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| SLH58_RS00120 (GPIMDABO_00021) | 21145..21462 | - | 318 | WP_000496058 | VirB3 family type IV secretion system protein | virB3 |
| SLH58_RS00125 (GPIMDABO_00022) | 21512..21805 | - | 294 | WP_001749962 | hypothetical protein | virB2 |
| SLH58_RS00130 (GPIMDABO_00023) | 21815..22096 | - | 282 | WP_000440698 | transcriptional repressor KorA | - |
| SLH58_RS00135 (GPIMDABO_00024) | 22105..22839 | - | 735 | WP_001749963 | lytic transglycosylase domain-containing protein | virB1 |
| SLH58_RS00140 (GPIMDABO_00025) | 22882..23253 | + | 372 | WP_011867773 | H-NS family nucleoid-associated regulatory protein | - |
| SLH58_RS00145 (GPIMDABO_00026) | 23269..23613 | + | 345 | WP_001749964 | hypothetical protein | - |
| SLH58_RS00150 (GPIMDABO_00027) | 23610..23924 | + | 315 | WP_001749965 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| SLH58_RS00155 (GPIMDABO_00028) | 24038..24271 | + | 234 | WP_001191790 | hypothetical protein | - |
| SLH58_RS00160 (GPIMDABO_00029) | 24321..24968 | + | 648 | WP_012561184 | restriction endonuclease | - |
| SLH58_RS00165 (GPIMDABO_00030) | 24973..25179 | + | 207 | WP_001749967 | hypothetical protein | - |
| SLH58_RS00170 (GPIMDABO_00031) | 25190..25462 | - | 273 | Protein_33 | IS1 family transposase | - |
| SLH58_RS00175 (GPIMDABO_00032) | 25561..26994 | + | 1434 | WP_001288432 | DNA cytosine methyltransferase | - |