T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 32630..50126
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SLH58_RS00150 (NCPKKNBD_00032) | 28300..29094 | + | 795 | WP_053075878 | DUF5417 domain-containing protein | - |
| SLH58_RS00155 (NCPKKNBD_00033) | 29276..29482 | + | 207 | WP_020323152 | DUF905 family protein | - |
| SLH58_RS00160 (NCPKKNBD_00034) | 29556..29738 | + | 183 | WP_000170167 | hypothetical protein | - |
| SLH58_RS00165 (NCPKKNBD_00035) | 29797..30168 | - | 372 | WP_227665545 | hypothetical protein | - |
| SLH58_RS00170 (NCPKKNBD_00036) | 30211..30579 | - | 369 | WP_032416596 | plasmid stabilization protein StbC | - |
| SLH58_RS00175 (NCPKKNBD_00037) | 30582..31298 | - | 717 | WP_020323147 | StbB family protein | - |
| SLH58_RS00180 (NCPKKNBD_00038) | 31307..31738 | - | 432 | WP_020323173 | plasmid stabilization protein StbA | - |
| SLH58_RS00185 (NCPKKNBD_00039) | 32154..32630 | + | 477 | WP_223226686 | traK protein | - |
| SLH58_RS00190 (NCPKKNBD_00040) | 32630..34162 | + | 1533 | WP_020323171 | type IV secretion system DNA-binding domain-containing protein | virb4 |
| SLH58_RS00195 (NCPKKNBD_00041) | 34167..37385 | + | 3219 | WP_020323154 | MobF family relaxase | - |
| SLH58_RS00200 (NCPKKNBD_00042) | 37382..38047 | + | 666 | WP_020323157 | DUF6710 family protein | - |
| SLH58_RS00205 (NCPKKNBD_00043) | 38040..38402 | + | 363 | WP_020323170 | hypothetical protein | - |
| SLH58_RS00210 (NCPKKNBD_00044) | 39018..39329 | - | 312 | WP_032416518 | hypothetical protein | - |
| SLH58_RS00215 (NCPKKNBD_00045) | 39326..39793 | - | 468 | WP_046092601 | phospholipase D family protein | - |
| SLH58_RS00220 (NCPKKNBD_00046) | 39850..40851 | - | 1002 | WP_020323165 | ATPase, T2SS/T4P/T4SS family | virB11 |
| SLH58_RS00225 (NCPKKNBD_00047) | 40902..42035 | - | 1134 | WP_020323153 | type IV secretion system protein VirB10 | virB10 |
| SLH58_RS00230 (NCPKKNBD_00048) | 42035..42922 | - | 888 | WP_020323166 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| SLH58_RS00235 (NCPKKNBD_00049) | 42933..43628 | - | 696 | WP_001208352 | type IV secretion system protein | virB8 |
| SLH58_RS00310 (NCPKKNBD_00050) | 43639..43770 | - | 132 | WP_032493177 | hypothetical protein | - |
| SLH58_RS00240 (NCPKKNBD_00051) | 43847..44884 | - | 1038 | WP_020323169 | type IV secretion system protein | virB6 |
| SLH58_RS00245 (NCPKKNBD_00052) | 44901..45143 | - | 243 | WP_000858958 | EexN family lipoprotein | - |
| SLH58_RS00250 (NCPKKNBD_00053) | 45153..45854 | - | 702 | WP_020323143 | type IV secretion system protein | virB5 |
| SLH58_RS00255 (NCPKKNBD_00054) | 45870..48443 | - | 2574 | WP_020323176 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| SLH58_RS00260 (NCPKKNBD_00055) | 48444..48761 | - | 318 | WP_000462629 | type IV secretion system protein VirB3 | virB3 |
| SLH58_RS00265 (NCPKKNBD_00056) | 48801..49142 | - | 342 | WP_001121032 | TrbC/VirB2 family protein | virB2 |
| SLH58_RS00270 (NCPKKNBD_00058) | 49344..50126 | - | 783 | WP_032416587 | lytic transglycosylase domain-containing protein | virB1 |
| SLH58_RS00275 (NCPKKNBD_00059) | 50190..50543 | + | 354 | WP_223598071 | H-NS histone family protein | - |
| SLH58_RS00280 (NCPKKNBD_00060) | 50547..50897 | + | 351 | WP_032416642 | hypothetical protein | - |
| SLH58_RS00285 (NCPKKNBD_00061) | 50876..51232 | + | 357 | WP_227665546 | hypothetical protein | - |
| SLH58_RS00290 (NCPKKNBD_00062) | 51236..51544 | + | 309 | WP_032416643 | hypothetical protein | - |
| SLH58_RS00295 (NCPKKNBD_00063) | 51829..52014 | + | 186 | WP_006118530 | ribbon-helix-helix domain-containing protein | - |
| SLH58_RS00300 (NCPKKNBD_00064) | 52011..52619 | - | 609 | WP_032449362 | recombinase family protein | - |
| SLH58_RS00305 (NCPKKNBD_00065) | 52785..53117 | - | 333 | WP_020323168 | hypothetical protein | - |