T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 42647..63812
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SLH58_RS00185 (OFKJFGJP_00039) | 38317..39111 | + | 795 | WP_053075878 | DUF5417 domain-containing protein | - |
| SLH58_RS00190 (OFKJFGJP_00040) | 39293..39499 | + | 207 | WP_020323152 | DUF905 family protein | - |
| SLH58_RS00195 (OFKJFGJP_00041) | 39573..39755 | + | 183 | WP_000170167 | hypothetical protein | - |
| SLH58_RS00200 (OFKJFGJP_00042) | 39814..40185 | - | 372 | WP_227665545 | hypothetical protein | - |
| SLH58_RS00205 (OFKJFGJP_00043) | 40228..40596 | - | 369 | WP_032416596 | plasmid stabilization protein StbC | - |
| SLH58_RS00210 (OFKJFGJP_00044) | 40599..41315 | - | 717 | WP_020323147 | StbB family protein | - |
| SLH58_RS00215 (OFKJFGJP_00045) | 41324..41755 | - | 432 | WP_020323173 | plasmid stabilization protein StbA | - |
| SLH58_RS00220 (OFKJFGJP_00046) | 42171..42647 | + | 477 | WP_223226686 | traK protein | - |
| SLH58_RS00225 (OFKJFGJP_00047) | 42647..44179 | + | 1533 | WP_020323171 | type IV secretion system DNA-binding domain-containing protein | virb4 |
| SLH58_RS00230 (OFKJFGJP_00048) | 44184..47402 | + | 3219 | WP_020323154 | MobF family relaxase | - |
| SLH58_RS00235 (OFKJFGJP_00049) | 47399..48064 | + | 666 | WP_020323157 | DUF6710 family protein | - |
| SLH58_RS00240 (OFKJFGJP_00050) | 48057..48419 | + | 363 | WP_020323170 | hypothetical protein | - |
| SLH58_RS00245 (OFKJFGJP_00051) | 49035..49346 | - | 312 | WP_032416518 | hypothetical protein | - |
| SLH58_RS00250 (OFKJFGJP_00052) | 49343..49810 | - | 468 | WP_046092601 | phospholipase D family protein | - |
| SLH58_RS00255 (OFKJFGJP_00053) | 49867..50868 | - | 1002 | WP_020323165 | ATPase, T2SS/T4P/T4SS family | virB11 |
| SLH58_RS00260 (OFKJFGJP_00054) | 50919..52052 | - | 1134 | WP_020323153 | type IV secretion system protein VirB10 | virB10 |
| SLH58_RS00265 (OFKJFGJP_00055) | 52052..52525 | - | 474 | WP_319382063 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| SLH58_RS00270 (OFKJFGJP_00056) | 52610..53215 | - | 606 | WP_000509966 | recombinase family protein | - |
| SLH58_RS00275 (OFKJFGJP_00057) | 53310..56207 | + | 2898 | WP_001553819 | Tn3-like element Tn5403 family transposase | - |
| SLH58_RS00280 (OFKJFGJP_00058) | 56204..56608 | - | 405 | WP_319382064 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| SLH58_RS00285 (OFKJFGJP_00059) | 56619..57314 | - | 696 | WP_001208352 | type IV secretion system protein | virB8 |
| SLH58_RS00360 (OFKJFGJP_00060) | 57325..57456 | - | 132 | WP_032493177 | hypothetical protein | - |
| SLH58_RS00290 (OFKJFGJP_00061) | 57533..58570 | - | 1038 | WP_020323169 | type IV secretion system protein | virB6 |
| SLH58_RS00295 (OFKJFGJP_00062) | 58587..58829 | - | 243 | WP_000858958 | EexN family lipoprotein | - |
| SLH58_RS00300 (OFKJFGJP_00063) | 58839..59540 | - | 702 | WP_020323143 | type IV secretion system protein | virB5 |
| SLH58_RS00305 (OFKJFGJP_00064) | 59556..62129 | - | 2574 | WP_020323176 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| SLH58_RS00310 (OFKJFGJP_00065) | 62130..62447 | - | 318 | WP_000462629 | type IV secretion system protein VirB3 | virB3 |
| SLH58_RS00315 (OFKJFGJP_00066) | 62487..62828 | - | 342 | WP_001121032 | TrbC/VirB2 family protein | virB2 |
| SLH58_RS00320 (OFKJFGJP_00068) | 63030..63812 | - | 783 | WP_032416587 | lytic transglycosylase domain-containing protein | virB1 |
| SLH58_RS00325 (OFKJFGJP_00069) | 63876..64229 | + | 354 | WP_223598071 | H-NS histone family protein | - |
| SLH58_RS00330 (OFKJFGJP_00070) | 64233..64583 | + | 351 | WP_032416642 | hypothetical protein | - |
| SLH58_RS00335 (OFKJFGJP_00071) | 64562..64918 | + | 357 | WP_227665546 | hypothetical protein | - |
| SLH58_RS00340 (OFKJFGJP_00072) | 64922..65230 | + | 309 | WP_032416643 | hypothetical protein | - |
| SLH58_RS00345 (OFKJFGJP_00073) | 65515..65700 | + | 186 | WP_006118530 | ribbon-helix-helix domain-containing protein | - |
| SLH58_RS00350 (OFKJFGJP_00074) | 65697..66305 | - | 609 | WP_032449362 | recombinase family protein | - |
| SLH58_RS00355 (OFKJFGJP_00075) | 66471..66803 | - | 333 | WP_020323168 | hypothetical protein | - |