T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 35842..46519
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5L43_RS21015 (C5L43_21005) | 30884..32440 | + | 1557 | WP_104730185 | IS91 family transposase | - |
| C5L43_RS21020 (C5L43_21010) | 33448..34668 | - | 1221 | WP_011114072 | plasmid replication initiator TrfA | - |
| C5L43_RS21025 (C5L43_21015) | 34715..35056 | - | 342 | WP_000019167 | single-stranded DNA-binding protein | - |
| C5L43_RS21030 (C5L43_21020) | 35170..35532 | + | 363 | WP_010890126 | transcriptional regulator | - |
| C5L43_RS21035 (C5L43_21025) | 35842..36804 | + | 963 | WP_000132020 | P-type conjugative transfer ATPase TrbB | virB11 |
| C5L43_RS21040 (C5L43_21030) | 36821..37285 | + | 465 | WP_011114046 | conjugal transfer system pilin TrbC | virB2 |
| C5L43_RS21045 (C5L43_21035) | 37289..37600 | + | 312 | WP_001207961 | conjugal transfer protein TrbD | virB3 |
| C5L43_RS21050 (C5L43_21040) | 37597..40155 | + | 2559 | WP_011342945 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| C5L43_RS21055 (C5L43_21045) | 40152..40934 | + | 783 | WP_006122481 | conjugal transfer protein TrbF | virB8 |
| C5L43_RS21060 (C5L43_21050) | 40952..41851 | + | 900 | WP_006122480 | P-type conjugative transfer protein TrbG | virB9 |
| C5L43_RS21065 (C5L43_21055) | 41854..42342 | + | 489 | WP_006122479 | conjugal transfer protein TrbH | - |
| C5L43_RS21070 (C5L43_21060) | 42347..43768 | + | 1422 | WP_011114050 | TrbI/VirB10 family protein | virB10 |
| C5L43_RS21075 (C5L43_21065) | 43789..44553 | + | 765 | WP_010890135 | P-type conjugative transfer protein TrbJ | virB5 |
| C5L43_RS21080 (C5L43_21070) | 44563..44790 | + | 228 | WP_000644148 | entry exclusion lipoprotein TrbK | - |
| C5L43_RS21085 (C5L43_21075) | 44801..46519 | + | 1719 | WP_011114051 | P-type conjugative transfer protein TrbL | virB6 |
| C5L43_RS21090 (C5L43_21080) | 46537..47124 | + | 588 | WP_010890138 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| C5L43_RS21095 (C5L43_21085) | 47138..47773 | + | 636 | WP_011114052 | transglycosylase SLT domain-containing protein | - |
| C5L43_RS21100 (C5L43_21090) | 47802..48068 | + | 267 | WP_010890140 | hypothetical protein | - |
| C5L43_RS21105 (C5L43_21095) | 48068..48766 | + | 699 | WP_011114053 | TraX family protein | - |
| C5L43_RS21110 (C5L43_21100) | 48782..49213 | + | 432 | WP_001665065 | OmpA family protein | - |
| C5L43_RS21115 (C5L43_21105) | 49368..50042 | + | 675 | WP_011178411 | DNA methylase | - |
| C5L43_RS21120 (C5L43_21110) | 50044..50871 | - | 828 | WP_012805980 | recombinase family protein | - |