T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 1..12123
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9307_RS27560 (C9307_27610) | 1..375 | - | 375 | WP_197733250 | TraU family protein | traU |
| C9307_RS27565 (C9307_27615) | 372..1004 | - | 633 | WP_001203720 | type-F conjugative transfer system protein TraW | traW |
| C9307_RS27570 (C9307_27620) | 1001..1387 | - | 387 | WP_000214082 | type-F conjugative transfer system protein TrbI | - |
| C9307_RS27575 (C9307_27625) | 1384..4011 | - | 2628 | WP_001064239 | type IV secretion system protein TraC | virb4 |
| C9307_RS27580 (C9307_27630) | 4171..4392 | - | 222 | WP_001278978 | conjugal transfer protein TraR | - |
| C9307_RS27585 (C9307_27635) | 4527..5042 | - | 516 | WP_000809893 | type IV conjugative transfer system lipoprotein TraV | traV |
| C9307_RS27590 (C9307_27640) | 5039..5290 | - | 252 | WP_001038341 | conjugal transfer protein TrbG | - |
| C9307_RS27595 (C9307_27645) | 5283..5603 | - | 321 | WP_001057302 | conjugal transfer protein TrbD | virb4 |
| C9307_RS27600 (C9307_27650) | 5590..6174 | - | 585 | WP_000002795 | conjugal transfer pilus-stabilizing protein TraP | - |
| C9307_RS27605 (C9307_27655) | 6164..7591 | - | 1428 | WP_000146638 | F-type conjugal transfer pilus assembly protein TraB | traB |
| C9307_RS27610 (C9307_27660) | 7591..8319 | - | 729 | WP_001230787 | type-F conjugative transfer system secretin TraK | traK |
| C9307_RS27615 (C9307_27665) | 8306..8872 | - | 567 | WP_000399804 | type IV conjugative transfer system protein TraE | traE |
| C9307_RS27620 (C9307_27670) | 8894..9205 | - | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| C9307_RS27625 (C9307_27675) | 9210..9572 | - | 363 | WP_001098998 | type IV conjugative transfer system pilin TraA | - |
| C9307_RS27630 (C9307_27680) | 9606..9833 | - | 228 | WP_001254388 | conjugal transfer relaxosome protein TraY | - |
| C9307_RS27635 (C9307_27685) | 9927..10613 | - | 687 | WP_000332487 | PAS domain-containing protein | - |
| C9307_RS27640 (C9307_27690) | 10807..11190 | - | 384 | WP_001151564 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| C9307_RS27645 (C9307_27695) | 11476..12123 | + | 648 | WP_000614282 | transglycosylase SLT domain-containing protein | virB1 |
| C9307_RS27650 (C9307_27700) | 12420..13241 | - | 822 | WP_001234469 | DUF932 domain-containing protein | - |
| C9307_RS27655 (C9307_27705) | 13362..13649 | - | 288 | WP_000107537 | hypothetical protein | - |
| C9307_RS31170 (C9307_27710) | 13674..13748 | - | 75 | Protein_20 | single-stranded DNA-binding protein | - |