T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 5426..32675
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H5D58_RS00015 | 1544..1876 | - | 333 | Protein_2 | peroxidase-related enzyme | - |
| H5D58_RS00020 | 1871..2260 | - | 390 | Protein_3 | DUF4158 domain-containing protein | - |
| H5D58_RS00025 | 2422..2979 | + | 558 | WP_001217881 | recombinase family protein | - |
| H5D58_RS00030 | 3162..4022 | + | 861 | WP_000027057 | broad-spectrum class A beta-lactamase TEM-1 | - |
| H5D58_RS00035 | 4161..4463 | - | 303 | WP_085327671 | histidine phosphatase family protein | - |
| H5D58_RS00040 | 4531..4926 | + | 396 | WP_015062852 | DUF1496 domain-containing protein | - |
| H5D58_RS00045 | 5031..5426 | + | 396 | WP_004187436 | lytic transglycosylase domain-containing protein | - |
| H5D58_RS00050 | 5426..6733 | + | 1308 | WP_015059988 | hypothetical protein | trbA |
| H5D58_RS00055 | 6744..7694 | + | 951 | WP_004206886 | DsbC family protein | trbB |
| H5D58_RS00060 | 7707..9794 | + | 2088 | WP_004206885 | conjugal transfer protein TrbC | - |
| H5D58_RS00460 | 9845..9940 | - | 96 | WP_004206884 | DinQ-like type I toxin DqlB | - |
| H5D58_RS00065 | 11167..12234 | - | 1068 | WP_024190316 | plasmid replication initiator RepA | - |
| H5D58_RS00070 | 12519..12749 | - | 231 | WP_004187496 | IncL/M type plasmid replication protein RepC | - |
| H5D58_RS00075 | 12823..13476 | - | 654 | WP_004206935 | hypothetical protein | - |
| H5D58_RS00080 | 13479..15659 | - | 2181 | WP_004187492 | DotA/TraY family protein | traY |
| H5D58_RS00085 | 15652..16302 | - | 651 | WP_004187488 | hypothetical protein | - |
| H5D58_RS00090 | 16299..17507 | - | 1209 | WP_004187486 | conjugal transfer protein TraW | traW |
| H5D58_RS00095 | 17504..20554 | - | 3051 | WP_011154474 | conjugative transfer protein | traU |
| H5D58_RS00100 | 20551..21045 | - | 495 | WP_085327669 | hypothetical protein | - |
| H5D58_RS00105 | 21091..21480 | - | 390 | WP_011154472 | DUF6750 family protein | traR |
| H5D58_RS00110 | 21497..22027 | - | 531 | WP_004187478 | conjugal transfer protein TraQ | traQ |
| H5D58_RS00115 | 22051..22755 | - | 705 | WP_045342064 | conjugal transfer protein TraP | traP |
| H5D58_RS00120 | 22767..24116 | - | 1350 | WP_004206932 | conjugal transfer protein TraO | traO |
| H5D58_RS00125 | 24128..25279 | - | 1152 | WP_015062843 | DotH/IcmK family type IV secretion protein | traN |
| H5D58_RS00130 | 25288..26070 | - | 783 | WP_004206929 | DotI/IcmL family type IV secretion protein | traM |
| H5D58_RS00135 | 26069..26479 | + | 411 | WP_004187465 | H-NS family nucleoid-associated regulatory protein | - |
| H5D58_RS00140 | 26466..26663 | + | 198 | WP_004187464 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| H5D58_RS00145 | 26664..27218 | - | 555 | WP_011154467 | hypothetical protein | traL |
| H5D58_RS00445 | 27142..30447 | - | 3306 | WP_220178452 | LPD7 domain-containing protein | - |
| H5D58_RS00155 | 30472..30732 | - | 261 | WP_004187310 | IcmT/TraK family protein | traK |
| H5D58_RS00160 | 30722..31885 | - | 1164 | WP_045342066 | plasmid transfer ATPase TraJ | virB11 |
| H5D58_RS00165 | 31896..32675 | - | 780 | WP_004187315 | type IV secretory system conjugative DNA transfer family protein | traI |
| H5D58_RS00170 | 32672..33172 | - | 501 | WP_004206925 | DotD/TraH family lipoprotein | - |
| H5D58_RS00175 | 33186..35165 | - | 1980 | WP_004206924 | TraI/MobA(P) family conjugative relaxase | - |
| H5D58_RS00180 | 35152..35469 | - | 318 | WP_004206923 | plasmid mobilization protein MobA | - |
| H5D58_RS00185 | 35745..36110 | + | 366 | WP_004206922 | hypothetical protein | - |
| H5D58_RS00190 | 36611..37147 | - | 537 | WP_004206920 | hypothetical protein | - |
| H5D58_RS00195 | 37280..37591 | - | 312 | WP_004187333 | hypothetical protein | - |